RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 TPBGLP0DKB5 382 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 PRKAR1AP10644 381 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 ENO3P13929 434 aaPredicted RBP16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 PVRP15151 417 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 HSD17B2P37059 387 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 PTGIRP43119 386 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 NFATC3Q12968 1075 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 CTBP1Q13363 440 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 DNASE1L3Q13609 305 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 CRYMQ14894 314 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 SF1Q15637 639 aaKnown RBP16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 LRRC8EQ6NSJ5 796 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 C16orf46Q6P387 395 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 NEK10Q6ZWH5 1172 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 DENND6AQ8IWF6 608 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 BBOF1Q8ND07 529 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 DENND1AQ8TEH3 1009 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 CT55Q8WUE5 264 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 KCNJ9Q92806 393 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 LRRC39Q96DD0 335 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 SNF8Q96H20 258 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 KLHL25Q9H0H3 589 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 STARD5Q9NSY2 213 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 IRAK4Q9NWZ3 460 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 SPHK1Q9NYA1 384 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 IL1RAPL1Q9NZN1 696 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 SPATA7Q9P0W8 599 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 FBXO5Q9UKT4 447 aa16.91■□□□□ 0.3
SCARNA2-201ENST00000458748 VPS26AO75436 327 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 OR2B3O76000 313 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 MATN4O95460 622 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 CATP04040 527 aaKnown RBP16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 CBSLP0DN79 551 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 AGXTP21549 392 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 F8A1P23610 371 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 CASQ1P31415 396 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 CBSP35520 551 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 SLC1A2P43004 574 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 ARL4CP56559 192 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 DHX9Q08211 1270 aaKnown RBP16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 BBS9Q3SYG4 887 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 HSP90AA5PQ58FG0 334 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 CDHR3Q6ZTQ4 885 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 KIAA0408Q6ZU52 694 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 OR1L3Q8NH93 324 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 HMGCLL1Q8TB92 370 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 FAM136AQ96C01 138 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 TRIM56Q9BRZ2 755 aaKnown RBP16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 TWSG1Q9GZX9 223 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 FBXO6Q9NRD1 293 aaPredicted RBP16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 IARS2Q9NSE4 1012 aaKnown RBP16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 PLCL2Q9UPR0 1127 aa16.9■□□□□ 0.3
SCARNA2-201ENST00000458748 SETXQ7Z333 2677 aaKnown RBP16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 MEN1O00255 615 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 EIF3FO00303 357 aaPredicted RBP16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 CREG1O75629 220 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 CD63P08962 238 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 OAS2P29728 719 aaKnown RBP16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 SKIV2L2P42285 1042 aaKnown RBP16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 POLE2P56282 527 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 GBX1Q14549 363 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 HIF1AQ16665 826 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 ZC3H12BQ5HYM0 836 aaKnown RBP16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 TLDC1Q6P9B6 456 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 PRICKLE2Q7Z3G6 844 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 MAATS1Q7Z4T9 603 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 SYVN1Q86TM6 617 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 TRIM73Q86UV7 250 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 LINC01555Q8NAE3 123 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 APOBEC4Q8WW27 367 aaKnown RBP16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 INPP5DQ92835 1189 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 NRTNQ99748 197 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 PPANQ9NQ55 473 aaKnown RBP16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 SRPK3Q9UPE1 567 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 NFS1Q9Y697 457 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 BOD1L1Q8NFC6 3051 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 SPTA1P02549 2419 aa16.89■□□□□ 0.29
SCARNA2-201ENST00000458748 TLN1Q9Y490 2541 aaKnown RBP16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 EFCAB8A8MWE9 144 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 C9J4A7 227 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 TTI1O43156 1089 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 PTPN4P29074 926 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 BDKRB1P46663 353 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 CLCN7P51798 805 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 NFKB2Q00653 900 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 KCNAB2Q13303 367 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 ERV3-1Q14264 604 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 GRB7Q14451 532 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 ARHGAP19Q14CB8 494 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 KLHL38Q2WGJ6 581 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 ZNF517Q6ZMY9 492 aaPredicted RBP16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 DSELQ8IZU8 1212 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 OR9A1PQ8NGU1 263 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 FLVCR1-AS1Q8TAF5 88 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 DLG3Q92796 817 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 ZUFSPQ96AP4 578 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 RNF31Q96EP0 1072 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 KRT12Q99456 494 aa16.88■□□□□ 0.29
SCARNA2-201ENST00000458748 MENTQ9BUN1 341 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms