RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 ELMO1Q92556 727 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 CHID1Q9BWS9 393 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 ELOVL6Q9H5J4 265 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 IL36AQ9UHA7 158 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 SLC8A2Q9UPR5 921 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 MYRFQ9Y2G1 1151 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 A0A1B0GTW7 788 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 PLOD2O00469 737 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 SLC9A3R1O14745 358 aaPredicted RBP16.25■□□□□ 0.19
CCDC43-202ENST00000457422 XYLBO75191 536 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 OR6B1O95007 311 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 SRPRAP08240 638 aaKnown RBP16.25■□□□□ 0.19
CCDC43-202ENST00000457422 GSTM1P09488 218 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 ATP6V1B1P15313 513 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 IRS1P35568 1242 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 ROR2Q01974 943 aaKnown RBP16.25■□□□□ 0.19
CCDC43-202ENST00000457422 GSTM4Q03013 218 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 ZNF33BQ06732 778 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 POM121L1PQ3SYA9 428 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 SLC36A3Q495N2 470 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 RUNDC3AQ59EK9 446 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 GRASPQ7Z6J2 395 aaPredicted RBP16.25■□□□□ 0.19
CCDC43-202ENST00000457422 TECPR1Q7Z6L1 1165 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 ZNF548Q8NEK5 533 aaPredicted RBP16.25■□□□□ 0.19
CCDC43-202ENST00000457422 OR2T12Q8NG77 320 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 PYCR2Q96C36 320 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 FBXL8Q96CD0 374 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 CMTM7Q96FZ5 175 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 VPS35Q96QK1 796 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 HAUS8Q9BT25 410 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 BDH2Q9BUT1 245 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 RIOK2Q9BVS4 552 aaKnown RBP16.25■□□□□ 0.19
CCDC43-202ENST00000457422 RBM38Q9H0Z9 239 aaKnown RBP16.25■□□□□ 0.19
CCDC43-202ENST00000457422 SLC25A37Q9NYZ2 338 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 MAN2B2Q9Y2E5 1009 aa16.25■□□□□ 0.19
CCDC43-202ENST00000457422 NUP210Q8TEM1 1887 aaPredicted RBP16.24■□□□□ 0.19
CCDC43-202ENST00000457422 FADS2P1A8MWK0 482 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 AREL1O15033 823 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 PRSS23O95084 383 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 MT-ND1P03886 318 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 SYN1P17600 705 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 MAPK1P28482 360 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 PPIGQ13427 754 aaKnown RBP eCLIP16.24■□□□□ 0.19
CCDC43-202ENST00000457422 MAP7Q14244 749 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 LDLRAP1Q5SW96 308 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 LRIF1Q5T3J3 769 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 BORAQ6PGQ7 559 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 SPRED2Q7Z698 418 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 SPDYE1Q8NFV5 336 aaPredicted RBP16.24■□□□□ 0.19
CCDC43-202ENST00000457422 TSPAN14Q8NG11 270 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 HM13Q8TCT9 377 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 TESCQ96BS2 214 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 RMND5BQ96G75 393 aaPredicted RBP16.24■□□□□ 0.19
CCDC43-202ENST00000457422 OR52E6Q96RD3 313 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 SEPHS2Q99611 448 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 GRIP2Q9C0E4 1043 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 CD320Q9NPF0 282 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 SLC22A14Q9Y267 594 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 DLGAP4Q9Y2H0 992 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 MYO7AQ13402 2215 aa16.24■□□□□ 0.19
CCDC43-202ENST00000457422 EI24O14681 340 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 UGDHO60701 494 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 PRAMEF4O60810 478 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 ERN1O75460 977 aaKnown RBP16.23■□□□□ 0.19
CCDC43-202ENST00000457422 ASLP04424 464 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 RAP2AP10114 183 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 JUPP14923 745 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 ITPKAP23677 461 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 MMP12P39900 470 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 NEK2P51955 445 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 PFN3P60673 137 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 UBE3AQ05086 875 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 CBX2Q14781 532 aaPredicted RBP16.23■□□□□ 0.19
CCDC43-202ENST00000457422 THEMIS2Q5TEJ8 643 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 PRAMEF9Q5VWM5 478 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 DNAJC14Q6Y2X3 702 aaPredicted RBP16.23■□□□□ 0.19
CCDC43-202ENST00000457422 ZNF366Q8N895 744 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 FAM47BQ8NA70 645 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 ITFG1Q8TB96 612 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 BTN2A2Q8WVV5 523 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 RNF145Q96MT1 663 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 HHIPQ96QV1 700 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 OSBPL6Q9BZF3 934 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 KCNH6Q9H252 994 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 FAM8A1Q9UBU6 413 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.23■□□□□ 0.19
CCDC43-202ENST00000457422 OR2AG2A6NM03 316 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 TLL1O43897 1013 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 PSIP1O75475 530 aaKnown RBP16.23■□□□□ 0.19
CCDC43-202ENST00000457422 GMNNO75496 209 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 CISD3P0C7P0 127 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 ZNF23P17027 643 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 NELFEP18615 380 aaKnown RBP16.23■□□□□ 0.19
CCDC43-202ENST00000457422 XPAP23025 273 aaPredicted RBP16.23■□□□□ 0.19
CCDC43-202ENST00000457422 HNRNPFP52597 415 aaKnown RBP16.23■□□□□ 0.19
CCDC43-202ENST00000457422 SH3BGRP55822 239 aaPredicted RBP16.23■□□□□ 0.19
CCDC43-202ENST00000457422 TUBA4AP68366 448 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 ZNF284Q2VY69 593 aa16.23■□□□□ 0.19
CCDC43-202ENST00000457422 FAM98BQ52LJ0 330 aaKnown RBP16.23■□□□□ 0.19
CCDC43-202ENST00000457422 PYCR3Q53H96 274 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms