RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 PRDX3P30048 256 aaKnown RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 PKLRP30613 574 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 SHMT2P34897 504 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 LSSP48449 732 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 PPM1FP49593 454 aaPredicted RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 CSRP3P50461 194 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 KPNA2P52292 529 aaKnown RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 ZNF460Q14592 562 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 USP10Q14694 798 aaKnown RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 NAA30Q147X3 362 aaPredicted RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 ZKSCAN8Q15776 578 aaPredicted RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 CYP2A13Q16696 494 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 SNAP47Q5SQN1 464 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 LRRC8EQ6NSJ5 796 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 IRGCQ6NXR0 463 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 TTC23LQ6PF05 361 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 C19orf48Q6RUI8 117 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 FAM92BQ6ZTR7 304 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 RAB11FIP2Q7L804 512 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 PRSS42Q7Z5A4 293 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 NKAPQ8N5F7 415 aaKnown RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 OR9A1PQ8NGU1 263 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 OR2L8Q8NGY9 312 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 WDR36Q8NI36 951 aaKnown RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 DENND1AQ8TEH3 1009 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 KLHL6Q8WZ60 621 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 ANKRD7Q92527 254 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 MRRFQ96E11 262 aaKnown RBP9.73□□□□□ -0.85
ATG4A-206ENST00000457035 LINGO1Q96FE5 620 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 PPM1MQ96MI6 270 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 IL17FQ96PD4 163 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 PKP4Q99569 1192 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 MAP3K3Q99759 626 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 DHRS4Q9BTZ2 278 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 SLC12A9Q9BXP2 914 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 PARD6BQ9BYG5 372 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 STRADBQ9C0K7 418 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 POLR1BQ9H9Y6 1135 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 POPDC3Q9HBV1 291 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 SYTL2Q9HCH5 934 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 SPHK1Q9NYA1 384 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 KLHL3Q9UH77 587 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 ADAMTS6Q9UKP5 1117 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 IKZF3Q9UKT9 509 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 POMT2Q9UKY4 750 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 SATB2Q9UPW6 733 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 PDE10AQ9Y233 779 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 PCDHGA8Q9Y5G5 932 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 CCDC88CQ9P219 2028 aa9.73□□□□□ -0.85
ATG4A-206ENST00000457035 IGHV5-51A0A0C4DH38 117 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 A0A1W2PPV9 198 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 PIPSLA2A3N6 862 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 POC1B-GALNT4F8VUJ3 575 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 AGRPO00253 132 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 MATN2O00339 956 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 SLC16A5O15375 505 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 PHGDHO43175 533 aaKnown RBP9.72□□□□□ -0.85
ATG4A-206ENST00000457035 KDM1AO60341 852 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 CATP04040 527 aaKnown RBP9.72□□□□□ -0.85
ATG4A-206ENST00000457035 MPOP05164 745 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 C8GP07360 202 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 ERGP11308 486 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 FGF3P11487 239 aaPredicted RBP9.72□□□□□ -0.85
ATG4A-206ENST00000457035 CCL4P13236 92 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 HGFP14210 728 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 STMN1P16949 149 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 PEBP1P30086 187 aaKnown RBP9.72□□□□□ -0.85
ATG4A-206ENST00000457035 MSH2P43246 934 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 SLC12A2P55011 1212 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 RAB10P61026 200 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 PRKAA1Q13131 559 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 EIF3IQ13347 325 aaKnown RBP9.72□□□□□ -0.85
ATG4A-206ENST00000457035 C3orf38Q5JPI3 329 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 MROH9Q5TGP6 573 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 CACHD1Q5VU97 1274 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 IGF2-ASQ6U949 168 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 UBE2R2Q712K3 238 aaPredicted RBP9.72□□□□□ -0.85
ATG4A-206ENST00000457035 PROSER1Q86XN7 944 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 MYO1HQ8N1T3 1032 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 FBXO39Q8N4B4 442 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 C2orf73Q8N5S3 287 aaPredicted RBP9.72□□□□□ -0.85
ATG4A-206ENST00000457035 AGBL5Q8NDL9 886 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 HMGCLL1Q8TB92 370 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 MDM1Q8TC05 714 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 MCOLN3Q8TDD5 553 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 AENQ8WTP8 325 aaKnown RBP9.72□□□□□ -0.85
ATG4A-206ENST00000457035 DCAKDQ8WVC6 231 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 TSPAN17Q96FV3 270 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 SLC41A2Q96JW4 573 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 UBXN10Q96LJ8 280 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 SLC46A1Q96NT5 459 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 OR2A14Q96R47 310 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 CD180Q99467 661 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 PAFAH2Q99487 392 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 CMKLR1Q99788 373 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 ZNF768Q9H5H4 540 aaKnown RBP9.72□□□□□ -0.85
ATG4A-206ENST00000457035 PARVBQ9HBI1 364 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 GPAMQ9HCL2 828 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 C1GALT1Q9NS00 363 aa9.72□□□□□ -0.85
ATG4A-206ENST00000457035 OCIAD1Q9NX40 245 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms