RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 REXO5Q96IC2 774 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 TEKT5Q96M29 485 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 NPY6RQ99463 290 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 C17orf62Q9BQA9 187 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 PPIL3Q9H2H8 161 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 CNGB3Q9NQW8 809 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 PXMP2Q9NR77 195 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 TRMT13Q9NUP7 481 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ADGRE2Q9UHX3 823 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 TDRD6O60522 2096 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 FREM3P0C091 2139 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 CHD3Q12873 2000 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 UBA6A0AVT1 1052 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 IQCF5A8MTL0 148 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 CACNG3O60359 315 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 PAHP00439 452 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ANKRD34CP0C6C1 535 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 HSD3B1P14060 373 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SERPINB1P30740 379 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ICAM3P32942 547 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 CASP2P42575 452 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 RAB10P61026 200 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 FOXD4Q12950 439 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 MXD4Q14582 209 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 KYAT1Q16773 422 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 GLYR1Q49A26 553 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC39A12Q504Y0 691 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 XKR7Q5GH72 579 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 GPR153Q6NV75 609 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 KCTD20Q7Z5Y7 419 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 KIAA0907Q7Z7F0 614 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ADAMTSL2Q86TH1 951 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 LAS2Q8IYD9 372 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 KRTCAP2Q8N6L1 136 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ZBTB44Q8NCP5 570 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF680Q8NEM1 530 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 TNIP2Q8NFZ5 429 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 RIT1Q92963 219 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 EXT2Q93063 718 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF707Q96C28 371 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ASIC4Q96FT7 647 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 METTL2AQ96IZ6 378 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 NELL2Q99435 816 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 CPNE1Q99829 537 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 MRPL4Q9BYD3 311 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 TMEM168Q9H0V1 697 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 EXO1Q9UQ84 846 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 CFL2Q9Y281 166 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 DENND4CQ5VZ89 1909 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 A0A1W2PQ72 361 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 MAGEB16A2A368 324 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM172BPA6NC97 362 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 CENPXA8MT69 81 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ACKR2O00590 384 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 MUSKO15146 869 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SCN2BO60939 215 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 HRGP04196 525 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ARF4P18085 180 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ATP5F1P24539 256 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 TBXAS1P24557 533 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 GDF5P43026 501 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 CLCNKAP51800 687 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 MAPK12P53778 367 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 YWHAEP62258 255 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF267Q14586 743 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 MAD2L1BPQ15013 274 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 HADHQ16836 314 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ZFP69Q49AA0 526 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SPANXN4Q5MJ08 99 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SHEQ5VZ18 495 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SAXO2Q658L1 398 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 FRA10AC1Q70Z53 315 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SYVN1Q86TM6 617 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 DENND1CQ8IV53 801 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 KLHDC8BQ8IXV7 354 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 CLHC1Q8NHS4 586 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 LHFPL5Q8TAF8 219 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 TWIST2Q8WVJ9 160 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 TUBGCP3Q96CW5 907 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 TBATAQ96M53 351 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 UGT2B28Q9BY64 529 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ASB7Q9H672 318 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 NECTIN3Q9NQS3 549 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ANAPC2Q9UJX6 822 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 DLGAP4Q9Y2H0 992 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 COL2A1P02458 1487 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 NCOA6Q14686 2063 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 VWA5AO00534 786 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 HOXB9P17482 250 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 PRKACAP17612 351 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 UBA1P22314 1058 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ADRA1BP35368 520 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ETV6P41212 452 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC15A1P46059 708 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 BRCC3P46736 316 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 CASP9P55211 416 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ERVPABLB-1P60509 514 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 TATDN3Q17R31 274 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 TRILQ7L0X0 811 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms