RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 OR10A6Q8NH74 314 aa12.21□□□□□ -0.45
ECHDC1-209ENST00000454591 TMEM169Q96HH4 297 aa12.21□□□□□ -0.45
ECHDC1-209ENST00000454591 MUS81Q96NY9 551 aa12.21□□□□□ -0.45
ECHDC1-209ENST00000454591 OR52E6Q96RD3 313 aa12.21□□□□□ -0.45
ECHDC1-209ENST00000454591 MBOAT4Q96T53 435 aa12.21□□□□□ -0.45
ECHDC1-209ENST00000454591 APOL5Q9BWW9 433 aa12.21□□□□□ -0.45
ECHDC1-209ENST00000454591 SUV39H2Q9H5I1 410 aa12.21□□□□□ -0.45
ECHDC1-209ENST00000454591 ACTR8Q9H981 624 aa12.21□□□□□ -0.45
ECHDC1-209ENST00000454591 GPN2Q9H9Y4 310 aaPredicted RBP12.21□□□□□ -0.45
ECHDC1-209ENST00000454591 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.21□□□□□ -0.45
ECHDC1-209ENST00000454591 FFAR3O14843 346 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 PER2O15055 1255 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 GPR42O15529 346 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 AP2A2O94973 939 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 CLIC3O95833 236 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 CST1P01037 141 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 PDYNP01213 254 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 URODP06132 367 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 ITGAMP11215 1152 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 ITGB6P18564 788 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 LAG3P18627 525 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 CCR7P32248 378 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 S100A3P33764 101 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 RYKP34925 604 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 DCDC1P59894 354 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 CSTF3Q12996 717 aaKnown RBP12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 TXNDC8Q6A555 127 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 C22orf39Q6P5X5 142 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 ENPP6Q6UWR7 440 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 TSPAN33Q86UF1 283 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 STK32CQ86UX6 486 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 HIPK1Q86Z02 1210 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 TMC8Q8IU68 726 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 FAM86B1Q8N7N1 296 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 CSGALNACT1Q8TDX6 532 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 FIG4Q92562 907 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 MRPS31Q92665 395 aaKnown RBP12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 FBXL8Q96CD0 374 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 HBEGFQ99075 208 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 BCL7BQ9BQE9 202 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 THUMPD3Q9BV44 507 aaKnown RBP12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 TOR3AQ9H497 397 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 CREBZFQ9NS37 354 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 SPG21Q9NZD8 308 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 LIMD1Q9UGP4 676 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 BLOC1S6Q9UL45 172 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 CDC14AQ9UNH5 594 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 ERVW-1Q9UQF0 538 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 INVSQ9Y283 1065 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 PCDHB14Q9Y5E9 798 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 PCDHGB1Q9Y5G3 927 aa12.21□□□□□ -0.46
ECHDC1-209ENST00000454591 A0A0J9YVX5 310 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 M0QX08 132 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 SEC24DO94855 1032 aaPredicted RBP12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 ATE1O95260 518 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 POP4O95707 220 aaKnown RBP12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 MT-ND1P03886 318 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 SEMG1P04279 462 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 INHBBP09529 407 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 ZNF30P17039 623 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 DCTP40126 519 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 SPINT3P49223 89 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 PTSQ03393 145 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 ARHGEF6Q15052 776 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 AAK1Q2M2I8 961 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 C6orf141Q5SZD1 244 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 LIPJQ5W064 366 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 LRRC66Q68CR7 880 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 GTF2IRD2BQ6EKJ0 949 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 XAF1Q6GPH4 301 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 LINC00299Q6ZSB3 139 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 UBE2R2Q712K3 238 aaPredicted RBP12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 GAREM2Q75VX8 874 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 SERPINA11Q86U17 422 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 GTF2IRD2Q86UP8 949 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 CLEC4FQ8N1N0 589 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 KRTCAP2Q8N6L1 136 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 ZNF557Q8N988 423 aaPredicted RBP12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 CHDHQ8NE62 594 aaPredicted RBP12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 FAM162AQ96A26 154 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 FAM120BQ96EK7 910 aaKnown RBP12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 NRBF2Q96F24 287 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 SCLYQ96I15 445 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 TOX2Q96NM4 488 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 SPATA9Q9BWV2 254 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 EMILIN2Q9BXX0 1053 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 AMBRA1Q9C0C7 1298 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 PIF1Q9H611 641 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 PALMDQ9NP74 551 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 TBCCD1Q9NVR7 557 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 ARL15Q9NXU5 204 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 C3orf18Q9UK00 162 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 MAPRE3Q9UPY8 281 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 DLGAP4Q9Y2H0 992 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 SH3BP1Q9Y3L3 701 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 HSPE1-MOB4S4R3N1 261 aa12.2□□□□□ -0.46
ECHDC1-209ENST00000454591 TSPAN11A1L157 253 aa12.19□□□□□ -0.46
ECHDC1-209ENST00000454591 SH3PXD2BA1X283 911 aa12.19□□□□□ -0.46
ECHDC1-209ENST00000454591 MRPS14O60783 128 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms