RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 IGFALSP35858 605 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 TRIM23P36406 574 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 ATP6V0D1P61421 351 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 ESRRGP62508 458 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 RHDQ02161 417 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 STX5Q13190 355 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 TRIM25Q14258 630 aaKnown RBP15.48■□□□□ 0.07
SNX17-204ENST00000453453 ZNF648Q5T619 568 aaPredicted RBP15.48■□□□□ 0.07
SNX17-204ENST00000453453 LRRC8EQ6NSJ5 796 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 AMIGO2Q86SJ2 522 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 PATL1Q86TB9 770 aaKnown RBP15.48■□□□□ 0.07
SNX17-204ENST00000453453 ANKFN1Q8N957 763 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 RASGEF1AQ8N9B8 481 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 ZBTB8BQ8NAP8 495 aaPredicted RBP15.48■□□□□ 0.07
SNX17-204ENST00000453453 CEP70Q8NHQ1 597 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 ZNF420Q8TAQ5 688 aaPredicted RBP15.48■□□□□ 0.07
SNX17-204ENST00000453453 EME1Q96AY2 570 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 NXNL1Q96CM4 212 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 UBXN10Q96LJ8 280 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 GPR174Q9BXC1 333 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 C1QTNF1Q9BXJ1 281 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 CLK4Q9HAZ1 481 aaKnown RBP15.48■□□□□ 0.07
SNX17-204ENST00000453453 SPATA6Q9NWH7 488 aaPredicted RBP15.48■□□□□ 0.07
SNX17-204ENST00000453453 RHBDL2Q9NX52 303 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 FAF1Q9UNN5 650 aaPredicted RBP15.48■□□□□ 0.07
SNX17-204ENST00000453453 AP4S1Q9Y587 144 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 PLXND1Q9Y4D7 1925 aa15.48■□□□□ 0.07
SNX17-204ENST00000453453 IGHV1OR15-9A0A0B4J2B8 117 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 TCRBV3S1A0A5B6 114 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 TRIM64A6NGJ6 449 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 OR2AG2A6NM03 316 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 GPR89AB7ZAQ6 455 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 AXIN1O15169 862 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 LATO43561 262 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 RBP1P09455 135 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 GSTM1P09488 218 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 GPR89BP0CG08 455 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 ENO3P13929 434 aaPredicted RBP15.47■□□□□ 0.07
SNX17-204ENST00000453453 PCSK6P29122 969 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 GLRBP48167 497 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 PRLHRP49683 370 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 MS4A2Q01362 244 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 GSTM4Q03013 218 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 PTK2BQ14289 1009 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 ACAP2Q15057 778 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 BCL7AQ4VC05 210 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 KLHL35Q6PF15 583 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 TMEM220Q6QAJ8 160 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 TRAPPC5Q8IUR0 188 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 AFAP1L2Q8N4X5 818 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 EFCAB3Q8N7B9 438 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 MFSD2AQ8NA29 543 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 MYOCQ99972 504 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 MRPL57Q9BQC6 102 aaKnown RBP15.47■□□□□ 0.07
SNX17-204ENST00000453453 DERL2Q9GZP9 239 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 PCED1AQ9H1Q7 454 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 C6orf106Q9H6K1 298 aaPredicted RBP15.47■□□□□ 0.07
SNX17-204ENST00000453453 PALMDQ9NP74 551 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 FZD3Q9NPG1 666 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 LATS2Q9NRM7 1088 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 IGSF5Q9NSI5 407 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 ZNF358Q9NW07 568 aa15.47■□□□□ 0.07
SNX17-204ENST00000453453 EIF3FO00303 357 aaPredicted RBP15.46■□□□□ 0.07
SNX17-204ENST00000453453 RAD51BO15315 384 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 PDGFBP01127 241 aaPredicted RBP15.46■□□□□ 0.07
SNX17-204ENST00000453453 HNRNPCP07910 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
SNX17-204ENST00000453453 CBSLP0DN79 551 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 MPSTP25325 297 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 CBSP35520 551 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 GMPRP36959 345 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 PXNP49023 591 aaPredicted RBP15.46■□□□□ 0.07
SNX17-204ENST00000453453 ZBED5Q49AG3 693 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 SYTL3Q4VX76 610 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 USP39Q53GS9 565 aaKnown RBP15.46■□□□□ 0.07
SNX17-204ENST00000453453 KRT80Q6KB66 452 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 DOK6Q6PKX4 331 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 TMEM207Q6UWW9 146 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 CPNE9Q8IYJ1 553 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 MYO1HQ8N1T3 1032 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 LKAAEAR1Q8TD35 194 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 ANKRD49Q8WVL7 239 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 RLN3Q8WXF3 142 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 ELMO1Q92556 727 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 LINGO1Q96FE5 620 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 CCM2Q9BSQ5 444 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 APOOQ9BUR5 198 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 FAM126AQ9BYI3 521 aaPredicted RBP15.46■□□□□ 0.07
SNX17-204ENST00000453453 MRPL46Q9H2W6 279 aaKnown RBP15.46■□□□□ 0.07
SNX17-204ENST00000453453 GALPQ9UBC7 116 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 GPR34Q9UPC5 381 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 WDR37Q9Y2I8 494 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 OR1A2Q9Y585 309 aa15.46■□□□□ 0.07
SNX17-204ENST00000453453 TMEM221A6NGB7 291 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 PRAMEF26H0Y7S4 382 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 M0R296 226 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 TFEBP19484 476 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 KELP23276 732 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 AOAHP28039 575 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 HMOX2P30519 316 aa15.46■□□□□ 0.06
SNX17-204ENST00000453453 PSME3P61289 254 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms