RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 UGT3A2Q3SY77 523 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 CCDC184Q52MB2 194 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 LBHQ53QV2 105 aaPredicted RBP3.66□□□□□ -1.82
VPS8-211ENST00000452140 C11orf63Q6NUN7 778 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 RBMS3Q6XE24 437 aaKnown RBP3.66□□□□□ -1.82
VPS8-211ENST00000452140 ISCA2Q86U28 154 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 METTL23Q86XA0 190 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 MMD2Q8IY49 270 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 MAML2Q8IZL2 1156 aaPredicted RBP3.66□□□□□ -1.82
VPS8-211ENST00000452140 STPG4Q8N801 248 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 BMPERQ8N8U9 685 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 KLHDC9Q8NEP7 349 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 PIGBQ92521 554 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 TM9SF4Q92544 642 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 EXOC4Q96A65 974 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 SENP5Q96HI0 755 aaPredicted RBP3.66□□□□□ -1.82
VPS8-211ENST00000452140 RMDN2Q96LZ7 410 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 FAM20AQ96MK3 541 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 SPATA33Q96N06 139 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 LRRC3BQ96PB8 259 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 INPP4AQ96PE3 977 aaPredicted RBP3.66□□□□□ -1.82
VPS8-211ENST00000452140 SPAG5Q96R06 1193 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 INTS14Q96SY0 518 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 ADPGKQ9BRR6 497 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 GTPBP2Q9BX10 602 aaKnown RBP3.66□□□□□ -1.82
VPS8-211ENST00000452140 LAT2Q9GZY6 243 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 CDH20Q9HBT6 801 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 ZNF334Q9HCZ1 680 aaPredicted RBP3.66□□□□□ -1.82
VPS8-211ENST00000452140 DNAJC4Q9NNZ3 241 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 FAM118AQ9NWS6 357 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 COQ3Q9NZJ6 369 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 ZDHHC2Q9UIJ5 367 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 ACAD8Q9UKU7 415 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 ICAM5Q9UMF0 924 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 WDR83OSQ9Y284 106 aa3.66□□□□□ -1.82
VPS8-211ENST00000452140 LOC101059948A0A1B0GTJ6 334 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 FAM172BPA6NC97 362 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 ANXA2P2A6NMY6 339 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 ZNF197O14709 1029 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 RNASEH1O60930 286 aaKnown RBP3.65□□□□□ -1.83
VPS8-211ENST00000452140 INHBAP08476 426 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 IGHV4-38-2P0DP08 117 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 CD27P26842 260 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 POU5F1Q01860 360 aaKnown RBP3.65□□□□□ -1.83
VPS8-211ENST00000452140 TAF10Q12962 218 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 SCARB2Q14108 478 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 ODF4Q2M2E3 257 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 ZC2HC1CQ53FD0 456 aaPredicted RBP3.65□□□□□ -1.83
VPS8-211ENST00000452140 MPP7Q5T2T1 576 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 HECTD3Q5T447 861 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 SLC27A1Q6PCB7 646 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 PET117Q6UWS5 81 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 MFSD6Q6ZSS7 791 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 C18orf65Q6ZTR6 163 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 EID3Q8N140 333 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 OR8H3Q8N146 312 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 NKAIN3Q8N8D7 197 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 MAPKAPK5-AS1Q8N8E1 139 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 GOT1L1Q8NHS2 421 aaPredicted RBP3.65□□□□□ -1.83
VPS8-211ENST00000452140 TMEM143Q96AN5 459 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 CCDC3Q9BQI4 270 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 FERMT1Q9BQL6 677 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 URM1Q9BTM9 101 aaKnown RBP3.65□□□□□ -1.83
VPS8-211ENST00000452140 THUMPD3Q9BV44 507 aaKnown RBP3.65□□□□□ -1.83
VPS8-211ENST00000452140 PRRG4Q9BZD6 226 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 XAB2Q9HCS7 855 aaKnown RBP3.65□□□□□ -1.83
VPS8-211ENST00000452140 SDR39U1Q9NRG7 319 aaPredicted RBP3.65□□□□□ -1.83
VPS8-211ENST00000452140 ECHDC1Q9NTX5 307 aa3.65□□□□□ -1.83
VPS8-211ENST00000452140 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.65□□□□□ -1.83
VPS8-211ENST00000452140 IGLV9-49A0A0B4J1Y8 123 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 ANKRD61A6NGH8 418 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 PRSS44E7EML9 344 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 CCDC188H7C350 402 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 PIGNO95427 931 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 NGFP01138 241 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 GBAP04062 536 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 UMODP07911 640 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 FRMD6-AS1P0C7T7 363 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 SAGP10523 405 aaPredicted RBP3.64□□□□□ -1.83
VPS8-211ENST00000452140 LIFP15018 202 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 HOXB6P17509 224 aaKnown RBP3.64□□□□□ -1.83
VPS8-211ENST00000452140 CDH3P22223 829 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 ACAT1P24752 427 aaKnown RBP3.64□□□□□ -1.83
VPS8-211ENST00000452140 CDC25CP30307 473 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 BMXP51813 675 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 GSDMDP57764 484 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 PHEXP78562 749 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 RBP5P82980 135 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 SQLEQ14534 574 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 XKR3Q5GH77 459 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 C6orf136Q5SQH8 315 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 CCNYL2Q5T2Q4 361 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 SFMBT2Q5VUG0 894 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 C11orf57Q6ZUT1 292 aaPredicted RBP3.64□□□□□ -1.83
VPS8-211ENST00000452140 MARK2Q7KZI7 788 aaKnown RBP3.64□□□□□ -1.83
VPS8-211ENST00000452140 TRMT1LQ7Z2T5 733 aaKnown RBP3.64□□□□□ -1.83
VPS8-211ENST00000452140 ABI3BPQ7Z7G0 1075 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 GLRX5Q86SX6 157 aa3.64□□□□□ -1.83
VPS8-211ENST00000452140 TRPT1Q86TN4 253 aaKnown RBP3.64□□□□□ -1.83
VPS8-211ENST00000452140 OR4K1Q8NGD4 311 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms