RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 NRDCO43847 1150 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 PRICKLE3O43900 615 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-208ENST00000452047 NDUFS3O75489 264 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 KLF7O75840 302 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-208ENST00000452047 S1PR4O95977 384 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 GCGRP47871 477 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 ADARP55265 1226 aaKnown RBP12.01□□□□□ -0.49
CPSF4-208ENST00000452047 EIF3BP55884 814 aaKnown RBP12.01□□□□□ -0.49
CPSF4-208ENST00000452047 KLRB1Q12918 225 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 CHAF1BQ13112 559 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 GBX1Q14549 363 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 RNF187Q5TA31 235 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-208ENST00000452047 MRNIPQ6NTE8 343 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 ASB18Q6ZVZ8 466 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 OTOAQ7RTW8 1153 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 N4BP2L2Q92802 583 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-208ENST00000452047 GBP5Q96PP8 586 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 TCF12Q99081 682 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 TRIM56Q9BRZ2 755 aaKnown RBP12.01□□□□□ -0.49
CPSF4-208ENST00000452047 SLC7A5P2Q9GIP4 190 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 ING2Q9H160 280 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 MLXIPLQ9NP71 852 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 RUVBL2Q9Y230 463 aaKnown RBP12.01□□□□□ -0.49
CPSF4-208ENST00000452047 KLHL20Q9Y2M5 609 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 NFS1Q9Y697 457 aa12.01□□□□□ -0.49
CPSF4-208ENST00000452047 LRRK2Q5S007 2527 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 NUP210LQ5VU65 1888 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 PCM1Q15154 2024 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 KRT87PA6NCN2 255 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 ARGFXA6NJG6 315 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 C9J4A7 227 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 NIPSNAP2O75323 286 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 C1orf105O95561 183 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 KRT14P02533 472 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 CBSLP0DN79 551 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 MLNP12872 115 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 OGNP20774 298 aaKnown RBP12□□□□□ -0.49
CPSF4-208ENST00000452047 AGXTP21549 392 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 CBSP35520 551 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 BDKRB1P46663 353 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 TERF1P54274 439 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 SARNPP82979 210 aaKnown RBP12□□□□□ -0.49
CPSF4-208ENST00000452047 FOXK1P85037 733 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 CCSMST1Q4G0I0 132 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 COLEC12Q5KU26 742 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 PAPD7Q5XG87 772 aaKnown RBP12□□□□□ -0.49
CPSF4-208ENST00000452047 TLDC1Q6P9B6 456 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 CENPUQ71F23 418 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 TAX1BP1Q86VP1 789 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 CILP2Q8IUL8 1156 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 REXO1L1PQ8IX06 675 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 C2orf73Q8N5S3 287 aaPredicted RBP12□□□□□ -0.49
CPSF4-208ENST00000452047 ZBTB2Q8N680 514 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 OTUD6BQ8N6M0 293 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 ZNF655Q8N720 491 aaPredicted RBP12□□□□□ -0.49
CPSF4-208ENST00000452047 PROKR1Q8TCW9 393 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 DENND1AQ8TEH3 1009 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 MAGOHBQ96A72 148 aaKnown RBP12□□□□□ -0.49
CPSF4-208ENST00000452047 SLC22A18Q96BI1 424 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 PBKQ96KB5 322 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 DHRS4Q9BTZ2 278 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 RAB11FIP5Q9BXF6 653 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 EURLQ9NYK6 297 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 DHCR7Q9UBM7 475 aaKnown RBP12□□□□□ -0.49
CPSF4-208ENST00000452047 SRPK3Q9UPE1 567 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 PLCL2Q9UPR0 1127 aa12□□□□□ -0.49
CPSF4-208ENST00000452047 PCDHGA9Q9Y5G4 932 aaKnown RBP12□□□□□ -0.49
CPSF4-208ENST00000452047 ANKRD12Q6UB98 2062 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 FAM237BA0A1B0GVD1 139 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 H3BMM5 538 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 PGRMC1O00264 195 aaKnown RBP11.99□□□□□ -0.49
CPSF4-208ENST00000452047 CNOT3O75175 753 aaKnown RBP11.99□□□□□ -0.49
CPSF4-208ENST00000452047 CEACAM4O75871 244 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 MATN4O95460 622 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 ESR1P03372 595 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 ATP5DP30049 168 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 FMO4P31512 558 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 COILP38432 576 aaPredicted RBP11.99□□□□□ -0.49
CPSF4-208ENST00000452047 MAGEA3P43357 314 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 ANKRD20A4Q4UJ75 823 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 C1orf189Q5VU69 101 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 FCRL6Q6DN72 434 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 CNSTQ6PJW8 725 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 CCDC137Q6PK04 289 aaKnown RBP11.99□□□□□ -0.49
CPSF4-208ENST00000452047 SDCCAG8Q86SQ7 713 aaPredicted RBP11.99□□□□□ -0.49
CPSF4-208ENST00000452047 AGGF1Q8N302 714 aaeCLIP11.99□□□□□ -0.49
CPSF4-208ENST00000452047 MCUQ8NE86 351 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 GSDMBQ8TAX9 411 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 HMGCLL1Q8TB92 370 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 COG1Q8WTW3 980 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 RAD51AP1Q96B01 352 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 SERPINB12Q96P63 405 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 C17orf62Q9BQA9 187 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 SLC25A23Q9BV35 468 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 XAB2Q9HCS7 855 aaKnown RBP11.99□□□□□ -0.49
CPSF4-208ENST00000452047 ACSS2Q9NR19 701 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 ENAMQ9NRM1 1142 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 IL1RAPL1Q9NZN1 696 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 GALPQ9UBC7 116 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 SLC39A10Q9ULF5 831 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms