RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 MTHFD2P13995 350 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 SLC19A1P41440 591 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 MFSD13AQ14CX5 517 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 CACHD1Q5VU97 1274 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 PLET1Q6UQ28 207 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 CHPFQ8IZ52 775 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 PYURFQ96I23 114 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 ASB7Q9H672 318 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 OLA1Q9NTK5 396 aaKnown RBP9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 CIB4A0PJX0 185 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 HCRTO43612 131 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 PDE9AO76083 593 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 G6PDP11413 515 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 SRP54P61011 504 aaKnown RBP9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 OLR1P78380 273 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 MGAT3Q09327 533 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 ASAH1Q13510 395 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 GALEQ14376 348 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF79Q15937 498 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 AMHR2Q16671 573 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 TIMM50Q3ZCQ8 353 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 ENTHD1Q8IYW4 607 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 NETO1Q8TDF5 533 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 DNAJA4Q8WW22 397 aaPredicted RBP9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 APH1BQ8WW43 257 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 WNT8BQ93098 351 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 SPATA9Q9BWV2 254 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 GTPBP2Q9BX10 602 aaKnown RBP9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 SRRQ9GZT4 340 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 IKZF5Q9H5V7 419 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 MIOSQ9NXC5 875 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 PSORS1C1Q9UIG5 152 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 TNFSF13BQ9Y275 285 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 KLK4Q9Y5K2 254 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 V9GYH0 126 aa9.21□□□□□ -0.94
SYNPO2-204ENST00000448416 LINC00862A6NCI5 91 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 ARVCFO00192 962 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 SLC22A5O76082 557 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 DIRAS1O95057 198 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 EGFRP00533 1210 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 CDK1P06493 297 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 RETP07949 1114 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 STSP08842 583 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 UROSP10746 265 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 HOXA9P31269 272 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 GNPDA1P46926 289 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 DSTNP60981 165 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 NRG1Q02297 640 aaPredicted RBP9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 ADIGQ0VDE8 80 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 MRPL28Q13084 256 aaKnown RBP9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 STXBP2Q15833 593 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 RBBP7Q16576 425 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 TATDN3Q17R31 274 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 PTCHD3Q3KNS1 767 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 SLC10A6Q3KNW5 377 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 INTS6LQ5JSJ4 861 aaKnown RBP9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 OTUD1Q5VV17 481 aaPredicted RBP9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 GARNL3Q5VVW2 1013 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 LAMTOR1Q6IAA8 161 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 OR2T5Q6IEZ7 315 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 TMEM65Q6PI78 240 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 FAM131AQ6UXB0 335 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 GPR149Q86SP6 731 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 OR2T29Q8NH02 315 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 NPY6RQ99463 290 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 NUSAP1Q9BXS6 441 aaKnown RBP9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 FZD8Q9H461 694 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 ATP6V1HQ9UI12 483 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 SCAF8Q9UPN6 1271 aaKnown RBP9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 MUSKO15146 869 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF682O95780 498 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 PTHP01270 115 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 VIPP01282 170 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 RPS3P23396 243 aaKnown RBP eCLIP9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 NUDT6P53370 316 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 CRISP3P54108 245 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 GEMP55040 296 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 HOXC5Q00444 222 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 NPRL3Q12980 569 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 XKR7Q5GH72 579 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 NOMO2Q5JPE7 1267 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 PDZK1Q5T2W1 519 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 ZBTB37Q5TC79 503 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 ARSKQ6UWY0 536 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 C16orf62Q7Z3J2 963 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 LAX1Q8IWV1 398 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 PHACTR4Q8IZ21 702 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 DCBLD1Q8N8Z6 715 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 MAGEB10Q96LZ2 347 aaPredicted RBP9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 COL21A1Q96P44 957 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 TTPALQ9BTX7 342 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 TRIM45Q9H8W5 580 aaPredicted RBP9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 ERVMER34-1Q9H9K5 563 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 NME7Q9Y5B8 376 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 CCL22O00626 93 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 FHP07954 510 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 CNPP09543 421 aaKnown RBP9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 CPN2P22792 545 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 KIR2DL3P43628 341 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 B2MP61769 119 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms