RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 BIRC8Q96P09 236 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 TUBGCP5Q96RT8 1024 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 UHRF1Q96T88 793 aaPredicted RBP3.98□□□□□ -1.77
PTPN12-208ENST00000447995 CLSTN3Q9BQT9 956 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 SPATA25Q9BR10 227 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 GPATCH1Q9BRR8 931 aaKnown RBP3.98□□□□□ -1.77
PTPN12-208ENST00000447995 FEM1AQ9BSK4 669 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 HAUS8Q9BT25 410 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 HGH1Q9BTY7 390 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 OSBPL11Q9BXB4 747 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 FAM126AQ9BYI3 521 aaPredicted RBP3.98□□□□□ -1.77
PTPN12-208ENST00000447995 MRPS26Q9BYN8 205 aaKnown RBP3.98□□□□□ -1.77
PTPN12-208ENST00000447995 BRINP2Q9C0B6 783 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 P2RY12Q9H244 342 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 EPB41L1Q9H4G0 881 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 ATP13A3Q9H7F0 1226 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 VCX3AQ9NNX9 186 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 SEMA4BQ9NPR2 832 aaPredicted RBP3.98□□□□□ -1.77
PTPN12-208ENST00000447995 MRPL17Q9NRX2 175 aaKnown RBP3.98□□□□□ -1.77
PTPN12-208ENST00000447995 GKN1Q9NS71 199 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 ARMC1Q9NVT9 282 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 AIG1Q9NVV5 245 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 SAGE1Q9NXZ1 904 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 IL17CQ9P0M4 197 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 THEGQ9P2T0 379 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 ABCD2Q9UBJ2 740 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 LHX3Q9UBR4 397 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 CD300AQ9UGN4 299 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 VPS51Q9UID3 782 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 RIMS3Q9UJD0 308 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 PCTPQ9UKL6 214 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 PADI4Q9UM07 663 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 PPT2Q9UMR5 302 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 FAM50BQ9Y247 325 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 DHRS7Q9Y394 339 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 SH3BP1Q9Y3L3 701 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 INSL5Q9Y5Q6 135 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 CPQQ9Y646 472 aa3.98□□□□□ -1.77
PTPN12-208ENST00000447995 VWA8A3KMH1 1905 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 MYLKQ15746 1914 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 GLYATL1P3A0A0U1RQE8 302 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 C1orf232A0A0U1RR37 186 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 ATP6AP2A0A1C7CYW4 349 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 A0A1W2PP18 115 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 ARHGAP10A1A4S6 786 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 C2orf78A6NCI8 922 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 CCDC154A6NI56 674 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 EIF4E1BA6NMX2 242 aaKnown RBP3.97□□□□□ -1.77
PTPN12-208ENST00000447995 K7ESM1 405 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 SLC28A1O00337 649 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 E2F3O00716 465 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 KPNA5O15131 536 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 HTRA2O43464 458 aaPredicted RBP3.97□□□□□ -1.77
PTPN12-208ENST00000447995 RGS14O43566 566 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 SYNCRIPO60506 623 aaKnown RBP3.97□□□□□ -1.77
PTPN12-208ENST00000447995 SNAP91O60641 907 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 NIPSNAP2O75323 286 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 GMNNO75496 209 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 EEDO75530 441 aaKnown RBP3.97□□□□□ -1.77
PTPN12-208ENST00000447995 GJB3O75712 270 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 SLC22A3O75751 556 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 ATP6AP2O75787 350 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 SORBS2O94875 1100 aaKnown RBP3.97□□□□□ -1.77
PTPN12-208ENST00000447995 WDR47O94967 919 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 TSPAN12O95859 305 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 OLFM2O95897 454 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 CD160O95971 181 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 GLUD1P00367 558 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 MT-CO1P00395 513 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 TRBC1P01850 177 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 LRG1P02750 347 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 CKMP06732 381 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 GPIP06744 558 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 ALDOCP09972 364 aaKnown RBP3.97□□□□□ -1.77
PTPN12-208ENST00000447995 LINC00032P0C843 101 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 ZCCHC18P0CG32 403 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 CBSLP0DN79 551 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 NME1P15531 152 aaKnown RBP3.97□□□□□ -1.77
PTPN12-208ENST00000447995 PSMC3P17980 439 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 TSPAN8P19075 237 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 TCN1P20061 433 aaPredicted RBP3.97□□□□□ -1.77
PTPN12-208ENST00000447995 DDX6P26196 483 aaKnown RBP eCLIP3.97□□□□□ -1.778e-6■■■□□ 17.2
PTPN12-208ENST00000447995 ACRV1P26436 265 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 HMOX2P30519 316 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 CBSP35520 551 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 SPAM1P38567 509 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 ARL1P40616 181 aaPredicted RBP3.97□□□□□ -1.77
PTPN12-208ENST00000447995 CSKP41240 450 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 DPP6P42658 865 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 RPL5P46777 297 aaKnown RBP3.97□□□□□ -1.77
PTPN12-208ENST00000447995 SGSHP51688 502 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 POLR2JP52435 117 aaKnown RBP3.97□□□□□ -1.77
PTPN12-208ENST00000447995 CCL23P55773 120 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 SNRPD1P62314 119 aaKnown RBP3.97□□□□□ -1.77
PTPN12-208ENST00000447995 SLC7A9P82251 487 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 MS4A2Q01362 244 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 DLX2Q07687 328 aaPredicted RBP3.97□□□□□ -1.77
PTPN12-208ENST00000447995 RALGDSQ12967 914 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 PRKG2Q13237 762 aa3.97□□□□□ -1.77
PTPN12-208ENST00000447995 DYNC1I2Q13409 638 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms