RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 LONRF1Q17RB8 773 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 WHAMMP3Q1A5X7 153 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 BBS9Q3SYG4 887 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 CPZQ66K79 652 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 DUPD1Q68J44 220 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 CENPUQ71F23 418 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 IGDCC3Q8IVU1 814 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 LMNTD2Q8IXW0 634 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 BBOF1Q8ND07 529 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 THAP4Q8WY91 577 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 ELMO1Q92556 727 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 LPGAT1Q92604 370 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 ZNF592Q92610 1267 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 PNPLA2Q96AD5 504 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 SNRNP40Q96DI7 357 aaKnown RBP12.07□□□□□ -0.48
SSR4-205ENST00000447375 PWWP2AQ96N64 755 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 BIRC8Q96P09 236 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 TUBB2BQ9BVA1 445 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 TSSK1BQ9BXA7 367 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 ING2Q9H160 280 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 WHRNQ9P202 907 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 KLHL3Q9UH77 587 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 HEBP2Q9Y5Z4 205 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 CFAP20Q9Y6A4 193 aaKnown RBP12.07□□□□□ -0.48
SSR4-205ENST00000447375 TEX264Q9Y6I9 313 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 COLEC10Q9Y6Z7 277 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 NF1P21359 2839 aa12.07□□□□□ -0.48
SSR4-205ENST00000447375 ARGFXA6NJG6 315 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 IQCF5A8MTL0 148 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 IFRD1O00458 451 aaPredicted RBP12.06□□□□□ -0.48
SSR4-205ENST00000447375 GPC4O75487 556 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 BANF1O75531 89 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 KIAA0754O94854 1291 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 S1PR4O95977 384 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 ESR1P03372 595 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 TYRP1P17643 537 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 AOAHP28039 575 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 ACADLP28330 430 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 NDUFS1P28331 727 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 PREPP48147 710 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 ARL4CP56559 192 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 DNASE1L3Q13609 305 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 THOC5Q13769 683 aaKnown RBP12.06□□□□□ -0.48
SSR4-205ENST00000447375 CRYMQ14894 314 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 SPANXN3Q5MJ09 141 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 SLC6A19Q695T7 634 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 ZNF470Q6ECI4 717 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 PTRHD1Q6GMV3 140 aaKnown RBP12.06□□□□□ -0.48
SSR4-205ENST00000447375 PLXDC1Q8IUK5 500 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 OTUD6BQ8N6M0 293 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 RBMXL3Q8N7X1 1067 aaKnown RBP12.06□□□□□ -0.48
SSR4-205ENST00000447375 ASZ1Q8WWH4 475 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 SEC14L1Q92503 715 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 TFGQ92734 400 aaPredicted RBP12.06□□□□□ -0.48
SSR4-205ENST00000447375 RAB33BQ9H082 229 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 KIR3DX1Q9H7L2 352 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 PLAC1Q9HBJ0 212 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 C20orf96Q9NUD7 363 aaPredicted RBP12.06□□□□□ -0.48
SSR4-205ENST00000447375 ASF1BQ9NVP2 202 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 INTS10Q9NVR2 710 aaKnown RBP12.06□□□□□ -0.48
SSR4-205ENST00000447375 GRHL1Q9NZI5 618 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 IL1RAPL1Q9NZN1 696 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 EPHA6Q9UF33 1036 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 SLC24A2Q9UI40 661 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 GNPTGQ9UJJ9 305 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 PADI1Q9ULC6 663 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 CDYLQ9Y232 598 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 VPS9D1Q9Y2B5 631 aa12.06□□□□□ -0.48
SSR4-205ENST00000447375 DNHD1Q96M86 4753 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 E7ESA3 106 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 H3BMM5 538 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 KPNA5O15131 536 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 SLCO2B1O94956 709 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 C9P02748 559 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 AMD1P17707 334 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 FMO4P31512 558 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 ELK3P41970 407 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 MAPK9P45984 424 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 CTBP1Q13363 440 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 KRT33BQ14525 404 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 BRD3Q15059 726 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 UGT8Q16880 541 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 HSP90AA5PQ58FG0 334 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 CTSL3PQ5NE16 218 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 DUS1LQ6P1R4 473 aaKnown RBP12.05□□□□□ -0.48
SSR4-205ENST00000447375 NAPRTQ6XQN6 538 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 HPS6Q86YV9 775 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 RASGRP3Q8IV61 690 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 DENND6AQ8IWF6 608 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 SLC22A15Q8IZD6 547 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 KRT222Q8N1A0 295 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 CISD2Q8N5K1 135 aaKnown RBP12.05□□□□□ -0.48
SSR4-205ENST00000447375 PHC3Q8NDX5 983 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 KIF18AQ8NI77 898 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 LKAAEAR1Q8TD35 194 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 CALML6Q8TD86 181 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 CT55Q8WUE5 264 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 LURAP1Q96LR2 239 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 PANX3Q96QZ0 392 aa12.05□□□□□ -0.48
SSR4-205ENST00000447375 FERD3LQ96RJ6 166 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms