RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 NEU2Q9Y3R4 380 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 AP1M2Q9Y6Q5 423 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 CCDC88CQ9P219 2028 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 KRT87PA6NCN2 255 aa19.97■□□□□ 0.79
SDC1-205ENST00000447124 KDM1AO60341 852 aa19.97■□□□□ 0.79
SDC1-205ENST00000447124 KLF7O75840 302 aaPredicted RBP19.97■□□□□ 0.79
SDC1-205ENST00000447124 MAGP20916 626 aa19.97■□□□□ 0.79
SDC1-205ENST00000447124 EIF3BP55884 814 aaKnown RBP19.97■□□□□ 0.79
SDC1-205ENST00000447124 FOXK1P85037 733 aa19.97■□□□□ 0.79
SDC1-205ENST00000447124 FCRL6Q6DN72 434 aa19.97■□□□□ 0.79
SDC1-205ENST00000447124 RHBDD2Q6NTF9 364 aa19.97■□□□□ 0.79
SDC1-205ENST00000447124 TAX1BP1Q86VP1 789 aa19.97■□□□□ 0.79
SDC1-205ENST00000447124 SPNS2Q8IVW8 549 aa19.97■□□□□ 0.79
SDC1-205ENST00000447124 TEX19Q8NA77 164 aa19.97■□□□□ 0.79
SDC1-205ENST00000447124 MAGOHBQ96A72 148 aaKnown RBP19.97■□□□□ 0.79
SDC1-205ENST00000447124 PANX3Q96QZ0 392 aa19.97■□□□□ 0.79
SDC1-205ENST00000447124 DPH2Q9BQC3 489 aaPredicted RBP19.97■□□□□ 0.79
SDC1-205ENST00000447124 EURLQ9NYK6 297 aa19.97■□□□□ 0.79
SDC1-205ENST00000447124 DHCR7Q9UBM7 475 aaKnown RBP19.97■□□□□ 0.79
SDC1-205ENST00000447124 RUVBL2Q9Y230 463 aaKnown RBP19.97■□□□□ 0.79
SDC1-205ENST00000447124 TNRC6AQ8NDV7 1962 aaKnown RBP19.97■□□□□ 0.79
SDC1-205ENST00000447124 PCSK5Q92824 1860 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 RASGRF2O14827 1237 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 CNOT3O75175 753 aaKnown RBP19.96■□□□□ 0.79
SDC1-205ENST00000447124 TMEM63AO94886 807 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 C1orf105O95561 183 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 AGXTP21549 392 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 GRIA3P42263 894 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 BDKRB1P46663 353 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 GCGRP47871 477 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 FOXL2P58012 376 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 TMED2Q15363 201 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 TYSND1Q2T9J0 566 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 MLIPQ5VWP3 458 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 CENPUQ71F23 418 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 SDCCAG8Q86SQ7 713 aaPredicted RBP19.96■□□□□ 0.79
SDC1-205ENST00000447124 MCATQ8IVS2 390 aaKnown RBP19.96■□□□□ 0.79
SDC1-205ENST00000447124 PBKQ96KB5 322 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 ACSS2Q9NR19 701 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 FLNCQ14315 2725 aa19.96■□□□□ 0.79
SDC1-205ENST00000447124 ZSCAN9O15535 394 aaPredicted RBP19.95■□□□□ 0.78
SDC1-205ENST00000447124 NIPSNAP2O75323 286 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 CEACAM4O75871 244 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 S1PR4O95977 384 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 RPN2P04844 631 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 F7P08709 466 aaPredicted RBP19.95■□□□□ 0.78
SDC1-205ENST00000447124 ATXN8OSP0DMR3 200 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 COILP38432 576 aaPredicted RBP19.95■□□□□ 0.78
SDC1-205ENST00000447124 GBX1Q14549 363 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 KIAA0930Q6ICG6 404 aaPredicted RBP19.95■□□□□ 0.78
SDC1-205ENST00000447124 MRNIPQ6NTE8 343 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 TLDC1Q6P9B6 456 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 FIGLAQ6QHK4 219 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 OTOAQ7RTW8 1153 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 REXO1L1PQ8IX06 675 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 AGGF1Q8N302 714 aaeCLIP19.95■□□□□ 0.78
SDC1-205ENST00000447124 OTUD6BQ8N6M0 293 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 DENND1AQ8TEH3 1009 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 RAD51AP1Q96B01 352 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 FAM136AQ96C01 138 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 TCF12Q99081 682 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 SLC25A23Q9BV35 468 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 SLC22A11Q9NSA0 550 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 IL1RAPL1Q9NZN1 696 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 SLC39A10Q9ULF5 831 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 CRYL1Q9Y2S2 319 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 JRKLQ9Y4A0 524 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 HECTD1Q9ULT8 2610 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 ANKRD12Q6UB98 2062 aa19.95■□□□□ 0.78
SDC1-205ENST00000447124 KPNA5O15131 536 aa19.94■□□□□ 0.78
SDC1-205ENST00000447124 MLLT10P55197 1068 aa19.94■□□□□ 0.78
SDC1-205ENST00000447124 DCDP81605 110 aaKnown RBP19.94■□□□□ 0.78
SDC1-205ENST00000447124 CYP1B1Q16678 543 aa19.94■□□□□ 0.78
SDC1-205ENST00000447124 PAPD7Q5XG87 772 aaKnown RBP19.94■□□□□ 0.78
SDC1-205ENST00000447124 NEPROQ6NW34 567 aa19.94■□□□□ 0.78
SDC1-205ENST00000447124 PROKR1Q8TCW9 393 aa19.94■□□□□ 0.78
SDC1-205ENST00000447124 COG1Q8WTW3 980 aa19.94■□□□□ 0.78
SDC1-205ENST00000447124 SLC22A18Q96BI1 424 aa19.94■□□□□ 0.78
SDC1-205ENST00000447124 DHRS4Q9BTZ2 278 aa19.94■□□□□ 0.78
SDC1-205ENST00000447124 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.94■□□□□ 0.78
SDC1-205ENST00000447124 PLAAQ9Y263 795 aa19.94■□□□□ 0.78
SDC1-205ENST00000447124 PCDHGA9Q9Y5G4 932 aaKnown RBP19.94■□□□□ 0.78
SDC1-205ENST00000447124 C9J4A7 227 aa19.93■□□□□ 0.78
SDC1-205ENST00000447124 ZNF185O15231 689 aa19.93■□□□□ 0.78
SDC1-205ENST00000447124 MATN4O95460 622 aa19.93■□□□□ 0.78
SDC1-205ENST00000447124 ADARP55265 1226 aaKnown RBP19.93■□□□□ 0.78
SDC1-205ENST00000447124 SARNPP82979 210 aaKnown RBP19.93■□□□□ 0.78
SDC1-205ENST00000447124 ATP1A4Q13733 1029 aa19.93■□□□□ 0.78
SDC1-205ENST00000447124 SLC9A5Q14940 896 aa19.93■□□□□ 0.78
SDC1-205ENST00000447124 SF1Q15637 639 aaKnown RBP19.93■□□□□ 0.78
SDC1-205ENST00000447124 ANKRD20A4Q4UJ75 823 aa19.93■□□□□ 0.78
SDC1-205ENST00000447124 MRPL14Q6P1L8 145 aaKnown RBP19.93■□□□□ 0.78
SDC1-205ENST00000447124 MCUQ8NE86 351 aa19.93■□□□□ 0.78
SDC1-205ENST00000447124 FDCSPQ8NFU4 85 aa19.93■□□□□ 0.78
SDC1-205ENST00000447124 SKA2Q8WVK7 121 aaPredicted RBP19.93■□□□□ 0.78
SDC1-205ENST00000447124 TSR3Q9UJK0 312 aaKnown RBP19.93■□□□□ 0.78
SDC1-205ENST00000447124 RELNP78509 3460 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 A0A1W2PPV9 198 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 SDR42E2A6NKP2 422 aa19.92■□□□□ 0.78
SDC1-205ENST00000447124 GOLGA8MH3BSY2 632 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms