RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 EMX2Q04743 252 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 SHQ1Q6PI26 577 aaKnown RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 PLCZ1Q86YW0 608 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 FCRL3Q96P31 734 aaPredicted RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 GPR21Q99679 349 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 RANGRFQ9HD47 186 aaPredicted RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 HSPE1-MOB4S4R3N1 261 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 MANBAO00462 879 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 PTPN2P17706 415 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 CD6P30203 668 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 C1orf220Q5T0J3 134 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 PPP1R26Q5T8A7 1209 aaPredicted RBP7.71□□□□□ -1.17
SMG1-202ENST00000446231 LYPLAL1Q5VWZ2 237 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 SIGIRRQ6IA17 410 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 C15orf52Q6ZUT6 534 aaKnown RBP7.71□□□□□ -1.17
SMG1-202ENST00000446231 B3GNT8Q7Z7M8 397 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 PARP16Q8N5Y8 322 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 NATD1Q8N6N6 113 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 RFKQ969G6 155 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 SEPT5Q99719 369 aaPredicted RBP7.71□□□□□ -1.17
SMG1-202ENST00000446231 NTPCRQ9BSD7 190 aaKnown RBP7.71□□□□□ -1.17
SMG1-202ENST00000446231 ZNF416Q9BWM5 594 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 ARAP3Q8WWN8 1544 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 FAM214AQ32MH5 1076 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 TSPYL5Q86VY4 417 aaPredicted RBP7.71□□□□□ -1.17
SMG1-202ENST00000446231 TMEM17Q86X19 198 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 GALNT11Q8NCW6 608 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 UBE2E3Q969T4 207 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 ZNF607Q96SK3 696 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 INIPQ9NRY2 104 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 MGAT4AQ9UM21 535 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 ALG5Q9Y673 324 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 CHST10O43529 356 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 PDGFAP04085 211 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 RPS5P46782 204 aaKnown RBP7.71□□□□□ -1.17
SMG1-202ENST00000446231 GTF2H2Q13888 395 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 GTF2H2CQ6P1K8 395 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 DNAJB8Q8NHS0 232 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 RC3H2Q9HBD1 1191 aaKnown RBP7.71□□□□□ -1.17
SMG1-202ENST00000446231 TVP23BQ9NYZ1 205 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 PCSK2P16519 638 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 ASMTP46597 345 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 C2CD4AQ8NCU7 369 aaPredicted RBP7.71□□□□□ -1.17
SMG1-202ENST00000446231 POLR2J2Q9GZM3 115 aaKnown RBP7.71□□□□□ -1.17
SMG1-202ENST00000446231 GIMAP2Q9UG22 337 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 KCNN3Q9UGI6 736 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 SRRDQ9UH36 339 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 PCM1Q15154 2024 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 MEIOCA2RUB1 952 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 SLC7A4O43246 635 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 LPOP22079 712 aaPredicted RBP7.71□□□□□ -1.17
SMG1-202ENST00000446231 OR1E1P30953 314 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 ASPAP45381 313 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 HECTD3Q5T447 861 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 MAP1SQ66K74 1059 aaPredicted RBP7.71□□□□□ -1.17
SMG1-202ENST00000446231 ZNF436Q9C0F3 470 aaPredicted RBP7.71□□□□□ -1.17
SMG1-202ENST00000446231 CCDC88CQ9P219 2028 aa7.71□□□□□ -1.17
SMG1-202ENST00000446231 PPRC1Q5VV67 1664 aaKnown RBP7.71□□□□□ -1.17
SMG1-202ENST00000446231 A0A1W2PQ09 198 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 PITPNM1O00562 1244 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 RACK1P63244 317 aaKnown RBP7.71□□□□□ -1.18
SMG1-202ENST00000446231 NIPAL4Q0D2K0 466 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 KLHL22Q53GT1 634 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 MARCH9Q86YJ5 346 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 SPATA22Q8NHS9 363 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 SETD6Q8TBK2 473 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 PDCD2LQ9BRP1 358 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 IGSF5Q9NSI5 407 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 HES2Q9Y543 173 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 DOCK10Q96BY6 2186 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 ATXN8OSP0DMR3 200 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 GJA9P57773 515 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 GRB7Q14451 532 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 FBXO48Q5FWF7 155 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 FAM20CQ8IXL6 584 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 OR4K2Q8NGD2 314 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 CIDECQ96AQ7 238 aaPredicted RBP7.71□□□□□ -1.18
SMG1-202ENST00000446231 LENG9Q96B70 501 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 TMEM74Q96NL1 305 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 PRKAB1Q9Y478 270 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 NBASA2RRP1 2371 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 FGF1P05230 155 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 SLC35E2BP0CK96 405 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 BUD31P41223 144 aaPredicted RBP7.71□□□□□ -1.18
SMG1-202ENST00000446231 BRCC3P46736 316 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 HJURPQ8NCD3 748 aaPredicted RBP7.71□□□□□ -1.18
SMG1-202ENST00000446231 CHDHQ8NE62 594 aaPredicted RBP7.71□□□□□ -1.18
SMG1-202ENST00000446231 TSSK6Q9BXA6 273 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 SDR39U1Q9NRG7 319 aaPredicted RBP7.71□□□□□ -1.18
SMG1-202ENST00000446231 AASSQ9UDR5 926 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 HECW2Q9P2P5 1572 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 DCLK1O15075 740 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 KPNA5O15131 536 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 DYNC1LI2O43237 492 aaPredicted RBP7.71□□□□□ -1.18
SMG1-202ENST00000446231 HTR1BP28222 390 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 OLIG2Q13516 323 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 ZNF234Q14588 700 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 OR8K5Q8NH50 307 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 ANKRD49Q8WVL7 239 aa7.71□□□□□ -1.18
SMG1-202ENST00000446231 EMCNQ9ULC0 261 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms