RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 TLR9Q9NR96 1032 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 PCDHB16Q9NRJ7 776 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 ABCB10Q9NRK6 738 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 TMPRSS4Q9NRS4 437 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.73□□□□□ -1.97
UBBP3-201ENST00000445497 ZNF275Q9NSD4 429 aaPredicted RBP2.73□□□□□ -1.97
UBBP3-201ENST00000445497 ZCCHC3Q9NUD5 404 aaKnown RBP2.73□□□□□ -1.97
UBBP3-201ENST00000445497 SETD4Q9NVD3 440 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 RHBDL2Q9NX52 303 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 CMTM6Q9NX76 183 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 SLC2A8Q9NY64 477 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 WSB2Q9NYS7 404 aaPredicted RBP2.73□□□□□ -1.97
UBBP3-201ENST00000445497 GTSE1Q9NYZ3 720 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 ADAM22Q9P0K1 906 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 GCNT4Q9P109 453 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 UVRAGQ9P2Y5 699 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 SEC14L3Q9UDX4 400 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 POLLQ9UGP5 575 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 MID2Q9UJV3 735 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 GGA2Q9UJY4 613 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 CBLCQ9ULV8 474 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 SLC12A4Q9UP95 1085 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 CNTN6Q9UQ52 1028 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 CDYLQ9Y232 598 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 GINS2Q9Y248 185 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 MRPS33Q9Y291 106 aaKnown RBP2.73□□□□□ -1.97
UBBP3-201ENST00000445497 DRG1Q9Y295 367 aaKnown RBP2.73□□□□□ -1.97
UBBP3-201ENST00000445497 RAXQ9Y2V3 346 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 PRG3Q9Y2Y8 225 aaPredicted RBP2.73□□□□□ -1.97
UBBP3-201ENST00000445497 ADAM18Q9Y3Q7 739 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 LRRC42Q9Y546 428 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 PCDHGC4Q9Y5F7 938 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 B3GALT1Q9Y5Z6 326 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 SLCO1B1Q9Y6L6 691 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 INSRP06213 1382 aa2.73□□□□□ -1.97
UBBP3-201ENST00000445497 PTPRCP08575 1304 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 WDR7Q9Y4E6 1490 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 TEX13CA0A0J9YWL9 993 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 PNMA6EA0A0J9YXQ4 647 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 A0A1W2PQM1 296 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 PRSS38A1L453 326 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 RAB19A4D1S5 217 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 OR14I1A6ND48 311 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 OR2W5A6NFC9 320 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 TMEM191CA6NGB0 347 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 C5orf52A6NGY3 159 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 FAM90A20PA6NIJ5 464 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 ASB14A6NK59 587 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 AQP7P3A6NL99 342 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 KCNU1A8MYU2 1149 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 TMEM114B3SHH9 223 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 E7ENQ6 273 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 H3BQ06 376 aaPredicted RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 RBAK-RBAKDNI3L0D1 243 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 ZNF213O14771 459 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 GRM6O15303 877 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 MID1O15344 667 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 NDUFS4O43181 175 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 SUV39H1O43463 412 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 PI15O43692 258 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 AKAP8O43823 692 aaKnown RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 SSX4O60224 188 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 NRP2O60462 931 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 TSPAN2O60636 221 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 PAGE4O60829 102 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 MMP20O60882 483 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 ATP9AO75110 1047 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 CSO75390 466 aaKnown RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 TAF5LO75529 589 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 SMNDC1O75940 238 aaKnown RBP eCLIP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 SLCO2B1O94956 709 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 OAZ2O95190 189 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 STBD1O95210 358 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 LY86O95711 162 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 ABHD16AO95870 558 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 APOC1P02654 83 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 AHSGP02765 367 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 MT-ND2P03891 347 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 C4BPAP04003 597 aaKnown RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 THBDP07204 575 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 CHRNGP07510 517 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 RHOP08100 348 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 F7P08709 466 aaPredicted RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 SAGP10523 405 aaPredicted RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 CYP4B1P13584 511 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 GSPT1P15170 499 aaKnown RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 IFNGR1P15260 489 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 ZNF44P15621 663 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 MALP21145 153 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 ACO1P21399 889 aaKnown RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 FBLP22087 321 aaKnown RBP2.72□□□□□ -1.97
UBBP3-201ENST00000445497 MST1P26927 711 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 GSTM2P28161 218 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 TEAD1P28347 426 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 MSX1P28360 303 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 HSD11B1P28845 292 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 TACR3P29371 465 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 IL12BP29460 328 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 LCN1P31025 176 aa2.72□□□□□ -1.97
UBBP3-201ENST00000445497 HOXA7P31268 230 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms