RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 UBQLN2Q9UHD9 624 aa18.26■□□□□ 0.51
SHANK3-203ENST00000445220 CACNA1FO60840 1977 aa18.26■□□□□ 0.51
SHANK3-203ENST00000445220 CXorf49A8MYA2 514 aaPredicted RBP18.26■□□□□ 0.51
SHANK3-203ENST00000445220 CDRT1O95170 752 aa18.26■□□□□ 0.51
SHANK3-203ENST00000445220 CLCN4P51793 760 aa18.26■□□□□ 0.51
SHANK3-203ENST00000445220 RPL19P84098 196 aaKnown RBP18.26■□□□□ 0.51
SHANK3-203ENST00000445220 TLR1Q15399 786 aa18.26■□□□□ 0.51
SHANK3-203ENST00000445220 PARP15Q460N3 678 aa18.26■□□□□ 0.51
SHANK3-203ENST00000445220 CIR1Q86X95 450 aaPredicted RBP18.26■□□□□ 0.51
SHANK3-203ENST00000445220 TMEM192Q8IY95 271 aa18.26■□□□□ 0.51
SHANK3-203ENST00000445220 GPER1Q99527 375 aa18.26■□□□□ 0.51
SHANK3-203ENST00000445220 OXCT2Q9BYC2 517 aaPredicted RBP18.26■□□□□ 0.51
SHANK3-203ENST00000445220 FMN2Q9NZ56 1722 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 C5orf51A6NDU8 294 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 INMT-MINDY4F8WBC2 141 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 TLR4O00206 839 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 ADH1AP07327 375 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 GNAZP19086 355 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 FPR1P21462 350 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 CPN2P22792 545 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 RAET1GQ6H3X3 334 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 NIPA2Q8N8Q9 360 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 OR10H5Q8NGA6 315 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 BIRC7Q96CA5 298 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 MYO19Q96H55 970 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 HERC2P3Q9BVR0 1158 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 IFT46Q9NQC8 304 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 PAQR5Q9NXK6 330 aaPredicted RBP18.25■□□□□ 0.51
SHANK3-203ENST00000445220 ASF1AQ9Y294 204 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 DENRO43583 198 aaKnown RBP18.25■□□□□ 0.51
SHANK3-203ENST00000445220 ECHS1P30084 290 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 SLC1A2P43004 574 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 DNASE1L1P49184 302 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 HEPACAMQ14CZ8 416 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 OCLNQ16625 522 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 TMEM17Q86X19 198 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 WACQ9BTA9 647 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 MARK1Q9P0L2 795 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 PCDHA2Q9Y5H9 948 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 PDPK1O15530 556 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 MOGSQ13724 837 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 MSANTD1Q6ZTZ1 278 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 C1orf216Q8TAB5 229 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 C7orf43Q8WVR3 580 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 BTN2A3PQ96KV6 586 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 AIF1LQ9BQI0 150 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 COMMD4Q9H0A8 199 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 MATN3O15232 486 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 GRIA1P42261 906 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 XKP51811 444 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 SLC30A8Q8IWU4 369 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 ARMC10Q8N2F6 343 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 SLC43A3Q8NBI5 491 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 EFHD2Q96C19 240 aaPredicted RBP18.25■□□□□ 0.51
SHANK3-203ENST00000445220 PDZD7Q9H5P4 517 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 USP29Q9HBJ7 922 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 HCN2Q9UL51 889 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 RIMKLBQ9ULI2 386 aa18.25■□□□□ 0.51
SHANK3-203ENST00000445220 PPEF2O14830 753 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 PMM2O15305 246 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 CST3P01034 146 aaPredicted RBP18.24■□□□□ 0.51
SHANK3-203ENST00000445220 C7P10643 843 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 ZDHHC20Q5W0Z9 365 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 TTLL2Q9BWV7 592 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 EQTNQ9NQ60 294 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 POLE4Q9NR33 117 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 CALML5Q9NZT1 146 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 ZDHHC2Q9UIJ5 367 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 RUVBL1Q9Y265 456 aaKnown RBP18.24■□□□□ 0.51
SHANK3-203ENST00000445220 GLYATL1P3A0A0U1RQE8 302 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 NEMP2A6NFY4 417 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 GOT2P00505 430 aaKnown RBP18.24■□□□□ 0.51
SHANK3-203ENST00000445220 SMAD3P84022 425 aaKnown RBP18.24■□□□□ 0.51
SHANK3-203ENST00000445220 FAM91A1Q658Y4 838 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 SCML4Q8N228 414 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 NAT16Q8N8M0 369 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 C1orf127Q8N9H9 656 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 CXorf40AQ8TE69 158 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 CLEC4DQ8WXI8 215 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 TMEM203Q969S6 136 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 BARD1Q99728 777 aaKnown RBP18.24■□□□□ 0.51
SHANK3-203ENST00000445220 NUDT15Q9NV35 164 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 SEC14L4Q9UDX3 406 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 MSRAQ9UJ68 235 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 TCRBV7S3A2A0A539 114 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 C1QTNF3-AMACRE9PGA6 284 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 H0YJX3 145 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 CLDN11O75508 207 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 OR2B3O76000 313 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 HLA-DPB1P04440 258 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 ASGR1P07306 291 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 CDKL1Q00532 357 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 MPPE1Q53F39 396 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 TMEM236Q5W0B7 351 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 MBLAC2Q68D91 279 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 GALNTL5Q7Z4T8 443 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 TMEM199Q8N511 208 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 STOML3Q8TAV4 291 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 ADAMTS10Q9H324 1103 aa18.24■□□□□ 0.51
SHANK3-203ENST00000445220 ADAMTS6Q9UKP5 1117 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms