RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 SLC38A3Q99624 504 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 BARD1Q99728 777 aaKnown RBP7.83□□□□□ -1.16
RIF1-205ENST00000444746 TRNAU1APQ9NX07 287 aaKnown RBP7.83□□□□□ -1.16
RIF1-205ENST00000444746 BTBD3Q9Y2F9 522 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 FEZF1A0PJY2 475 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 CENPXA8MT69 81 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 IL12RB1P42701 662 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 PTGER3P43115 390 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 STXBP1P61764 594 aaKnown RBP7.83□□□□□ -1.16
RIF1-205ENST00000444746 RGS21Q2M5E4 152 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 DCST1Q5T197 706 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 ZDHHC20Q5W0Z9 365 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 PSAPL1Q6NUJ1 521 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 SNX20Q7Z614 316 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 TERB1Q8NA31 727 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 BADQ92934 168 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 SLC9A7Q96T83 725 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 PRRG4Q9BZD6 226 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 SNTG1Q9NSN8 517 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 URADA6NGE7 173 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 GPR39O43194 453 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 SLC7A4O43246 635 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 ERI3O43414 337 aaKnown RBP7.83□□□□□ -1.16
RIF1-205ENST00000444746 TBX10O75333 385 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 CSN2P05814 226 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 GALTP07902 379 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 CDH5P33151 784 aaPredicted RBP7.83□□□□□ -1.16
RIF1-205ENST00000444746 NUP62P37198 522 aaPredicted RBP7.83□□□□□ -1.16
RIF1-205ENST00000444746 ZNF252P-AS1Q0IIN9 211 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 PPIGQ13427 754 aaKnown RBP eCLIP7.83□□□□□ -1.161e-6■■□□□ 12.1
RIF1-205ENST00000444746 SFT2D3Q587I9 215 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 MCFD2Q8NI22 146 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 SLC35G5Q96KT7 338 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 SSR3Q9UNL2 185 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 SAMD4AQ9UPU9 718 aaKnown RBP7.83□□□□□ -1.16
RIF1-205ENST00000444746 LOC110117498-PIK3R3F6TDL0 507 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 K7EPI3 171 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 ARPC2O15144 300 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 COL6A2P12110 1019 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 VIPR2P41587 438 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 CDKN2DP55273 166 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 ABATP80404 500 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 ELP6Q0PNE2 266 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 KIAA0930Q6ICG6 404 aaPredicted RBP7.83□□□□□ -1.16
RIF1-205ENST00000444746 RPTNQ6XPR3 784 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 TSEN15Q8WW01 171 aaKnown RBP7.83□□□□□ -1.16
RIF1-205ENST00000444746 NSMCE3Q96MG7 304 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 FIZ1Q96SL8 496 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 ITM2CQ9NQX7 267 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 RIMKLBQ9ULI2 386 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 SLIT2O94813 1529 aa7.83□□□□□ -1.16
RIF1-205ENST00000444746 TTC34A8MYJ7 566 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 PIRO00625 290 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 PAK4O96013 591 aaPredicted RBP7.82□□□□□ -1.16
RIF1-205ENST00000444746 PTCHD3Q3KNS1 767 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 TBC1D21Q8IYX1 336 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 KIFC1Q9BW19 673 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 INSL5Q9Y5Q6 135 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 WNT9AO14904 365 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 TGDSO95455 350 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 HADHBP55084 474 aaKnown RBP7.82□□□□□ -1.16
RIF1-205ENST00000444746 HERVK_113P63132 956 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 TREML1Q86YW5 311 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 NIPA2Q8N8Q9 360 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 COL21A1Q96P44 957 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 ERVK-6Q9BXR3 956 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 BHLHE41Q9C0J9 482 aaPredicted RBP7.82□□□□□ -1.16
RIF1-205ENST00000444746 TMCO1Q9UM00 188 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 OAZ3Q9UMX2 235 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 TEX264Q9Y6I9 313 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 CARNS1A5YM72 827 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 RPP14O95059 124 aaKnown RBP7.82□□□□□ -1.16
RIF1-205ENST00000444746 CCNB2O95067 398 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 C6orf47O95873 294 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 F2P00734 622 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 LAMP2P13473 410 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 ATP1B2P14415 290 aaPredicted RBP7.82□□□□□ -1.16
RIF1-205ENST00000444746 CD247P20963 164 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 AP1S1P61966 158 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 ILF3Q12906 894 aaKnown RBP eCLIP7.82□□□□□ -1.162e-9■■■□□ 17.4
RIF1-205ENST00000444746 UPP1Q16831 310 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 ZNF789Q5FWF6 425 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 ANO7Q6IWH7 933 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 TSPAN33Q86UF1 283 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 FAM46DQ8NEK8 389 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 LMX1AQ8TE12 382 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 SLC35A5Q9BS91 424 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 IL21RQ9HBE5 538 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 PNPLA8Q9NP80 782 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 BBIP1A8MTZ0 92 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 ESR1P03372 595 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 MYL9P24844 172 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 HNF1BP35680 557 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 MEP1AQ16819 746 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 SPANXN4Q5MJ08 99 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 AMZ2Q86W34 360 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 OR10H4Q8NGA5 316 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 SIGLEC10Q96LC7 697 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 NPY6RQ99463 290 aa7.82□□□□□ -1.16
RIF1-205ENST00000444746 ADAMTS10Q9H324 1103 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms