RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 NDRG4Q9ULP0 352 aaKnown RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 USP22Q9UPT9 525 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 POLR3HQ9Y535 204 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 KCNC1P48547 511 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 PER3P56645 1201 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 GBX1Q14549 363 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 MAD2L1BPQ15013 274 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 ANKRD34AQ69YU3 496 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 TIGD4Q8IY51 512 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 CLEC4CQ8WTT0 213 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 CAMKK2Q96RR4 588 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 ASPNQ9BXN1 380 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 PIGVQ9NUD9 493 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 DNMT3BQ9UBC3 853 aaKnown RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 PIPSLA2A3N6 862 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 WASHC1A8K0Z3 465 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 AP3D1O14617 1153 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 DCLK1O15075 740 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 PAPSS2O95340 614 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 CPN2P22792 545 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 CHRNA4P43681 627 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 KCTD11Q693B1 232 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 PLAG1Q6DJT9 500 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 EFCAB12Q6NXP0 572 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 RASSF6Q6ZTQ3 369 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 PTCHD4Q6ZW05 846 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 ABCB9Q9NP78 766 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 TAS2R13Q9NYV9 303 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 KCTD3Q9Y597 815 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 KERAO60938 352 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 ULK1O75385 1050 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 GGT2P36268 569 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 RPA4Q13156 261 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 OR4D1Q15615 310 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 FBXO48Q5FWF7 155 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 WDR36Q8NI36 951 aaKnown RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 C18orf25Q96B23 403 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 SLC6A15Q9H2J7 730 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 CATSPERZQ9NTU4 200 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 A8MUA0 341 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 FFAR3O14843 346 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 GPR42O15529 346 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 B3GALNT1O75752 331 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 SCO1O75880 301 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 PRAMEF1O95521 474 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 S1PR4O95977 384 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 PEPDP12955 493 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 LHCGRP22888 699 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 AAK1Q2M2I8 961 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 DGKKQ5KSL6 1271 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 OSTM1Q86WC4 334 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 TP53INP2Q8IXH6 220 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 ZBTB44Q8NCP5 570 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 BRSK1Q8TDC3 778 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 ZNF566Q969W8 418 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 MYLPFQ96A32 169 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 C1GALT1C1Q96EU7 318 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 EGFL8Q99944 293 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 LPIN3Q9BQK8 851 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 CDT1Q9H211 546 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 TMPRSS4Q9NRS4 437 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 SLC12A8A0AV02 714 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 PRR23D1E9PI22 279 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 FABP3P05413 133 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 PRR23D2P0DMB1 279 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 KELP23276 732 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 C10orf62Q5T681 223 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 GLRX5Q86SX6 157 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 TRPV1Q8NER1 839 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 FBLIM1Q8WUP2 373 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 THUMPD1Q9NXG2 353 aaKnown RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 OTCP00480 354 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 NAGAP17050 411 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 RHAGQ02094 409 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 CCNJQ5T5M9 372 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 KDM4DQ6B0I6 523 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 LAPTM4BQ86VI4 370 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 DCBLD1Q8N8Z6 715 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 DTX3Q8N9I9 347 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 NETO1Q8TDF5 533 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 SPRTNQ9H040 489 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 TRAPPC4Q9Y296 219 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 SHOXO15266 292 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 MAFO75444 373 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 CCR1P32246 355 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 MAP2K3P46734 347 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 IL2P60568 153 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 C1DQ13901 141 aaKnown RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 SMN1Q16637 294 aaKnown RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 MZT2AQ6P582 158 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 NKAPQ8N5F7 415 aaKnown RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 ZNF382Q96SR6 550 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 DPCDQ9BVM2 203 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 OR51E2Q9H255 320 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 SLC23A1Q9UHI7 598 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 TSR3Q9UJK0 312 aaKnown RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 SPATA2Q9UM82 520 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 LRRC14BA6NHZ5 514 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 SLC7A4O43246 635 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 SEC22BO75396 215 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms