RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 INPP5KQ9BT40 448 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 CIPCQ9C0C6 399 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 OR51E2Q9H255 320 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 CPNE5Q9HCH3 593 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 NMRK2Q9NPI5 230 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 TLR9Q9NR96 1032 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 PAQR5Q9NXK6 330 aaPredicted RBP8.86□□□□□ -0.99
COPB1-202ENST00000439561 UGT2A1Q9Y4X1 527 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 PCDHB9Q9Y5E1 797 aa8.86□□□□□ -0.99
COPB1-202ENST00000439561 MICAL3Q7RTP6 2002 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 SMIM35A0A1B0GVV1 85 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 F8W810 466 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 ARHGEF9O43307 516 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 ALDH2P05091 517 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 RPLP0P05388 317 aaKnown RBP8.85□□□□□ -0.99
COPB1-202ENST00000439561 IFI30P13284 250 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 EPB42P16452 691 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 CASP3P42574 277 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 SLC15A1P46059 708 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 PSEN2P49810 448 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 RACK1P63244 317 aaKnown RBP8.85□□□□□ -0.99
COPB1-202ENST00000439561 CD83Q01151 205 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 CREMQ03060 361 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 ELP6Q0PNE2 266 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 MS4A13Q5J8X5 152 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 OR4F3Q6IEY1 312 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 ALKAL1Q6UXT8 129 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 MBOAT1Q6ZNC8 495 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 ADAMTSL2Q86TH1 951 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 ZNF598Q86UK7 904 aaKnown RBP8.85□□□□□ -0.99
COPB1-202ENST00000439561 TRIM48Q8IWZ4 208 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 CAMKK1Q8N5S9 505 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 ZNF548Q8NEK5 533 aaPredicted RBP8.85□□□□□ -0.99
COPB1-202ENST00000439561 OR8J3Q8NGG0 315 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 OR10T2Q8NGX3 314 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 MYDGFQ969H8 173 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 SLC38A4Q969I6 547 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 PYCR2Q96C36 320 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 FAM126AQ9BYI3 521 aaPredicted RBP8.85□□□□□ -0.99
COPB1-202ENST00000439561 TM6SF2Q9BZW4 377 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 ARL15Q9NXU5 204 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 ZNF225Q9UK10 706 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 ZNF831Q5JPB2 1677 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 MCM3APO60318 1980 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 ANKRD34BA5PLL1 514 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 EPN2O95208 641 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 CSF2P04141 144 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 STSP08842 583 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 PBX3P40426 434 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 MASP1P48740 699 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 FCGRTP55899 365 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 CYP27C1Q4G0S4 372 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 UBXN11Q5T124 520 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 KIAA1614Q5VZ46 1190 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 USP43Q70EL4 1123 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 SYT12Q8IV01 421 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 FAM217AQ8IXS0 508 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 METTL4Q8N3J2 472 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 PGBD5Q8N414 524 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 MFSD4AQ8N468 514 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 LINC01465Q8N7H1 131 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 ZNF382Q96SR6 550 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 CNPPD1Q9BV87 410 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 MMP27Q9H306 513 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 TIGARQ9NQ88 270 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 AASDHPPTQ9NRN7 309 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 THUMPD1Q9NXG2 353 aaKnown RBP8.85□□□□□ -0.99
COPB1-202ENST00000439561 TMEM98Q9Y2Y6 226 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 COL4A5P29400 1685 aa8.85□□□□□ -0.99
COPB1-202ENST00000439561 AGAP5A6NIR3 686 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 TTC34A8MYJ7 566 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 LOC730098B7Z3J9 87 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 STX16O14662 325 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 MUSKO15146 869 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 IL6P05231 212 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 ATXN1LP0C7T5 689 aaKnown RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 COX7A2P14406 83 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 MZF1P28698 734 aaPredicted RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 LIPAP38571 399 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 EIF2DP41214 584 aaKnown RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 CSRP3P50461 194 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 RPS14P62263 151 aaKnown RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 LRIT3Q3SXY7 679 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 USP39Q53GS9 565 aaKnown RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 CARD16Q5EG05 197 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 SNAP47Q5SQN1 464 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 ZNF544Q6NX49 715 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 RGL4Q8IZJ4 473 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 PARP16Q8N5Y8 322 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 ASCC1Q8N9N2 400 aaKnown RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 DYNC2LI1Q8TCX1 351 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 GTF2H4Q92759 462 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 GTPBP3Q969Y2 492 aaKnown RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 TRNT1Q96Q11 434 aaKnown RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 BRINP2Q9C0B6 783 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 ABHD16BQ9H3Z7 469 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 GPR83Q9NYM4 423 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 SH3BP4Q9P0V3 963 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 MOSPD1Q9UJG1 213 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 PRRC2BQ5JSZ5 2229 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms