RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SUSD1Q6UWL2 747 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 PAMR1Q6UXH9 720 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 ZNF551Q7Z340 670 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-204ENST00000438964 GLCCI1Q86VQ1 547 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 HIPK1Q86Z02 1210 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 SCN4BQ8IWT1 228 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 RNF175Q8N4F7 328 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 SUN5Q8TC36 379 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 CEP19Q96LK0 163 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 DPY30Q9C005 99 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 NSUN3Q9H649 340 aaKnown RBP13.08□□□□□ -0.32
ACTN1-204ENST00000438964 NMUR1Q9HB89 426 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 MOV10Q9HCE1 1003 aaKnown RBP13.08□□□□□ -0.32
ACTN1-204ENST00000438964 TMEM39AQ9NV64 488 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 HAT1O14929 419 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 PEX11BO96011 259 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 PTHP01270 115 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 APOA1P02647 267 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 PGRP06401 933 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 GRK3P35626 688 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 CTSKP43235 329 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 STC1P52823 247 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 KYAT1Q16773 422 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 ZNF181Q2M3W8 571 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 SPANXN2Q5MJ10 180 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 PIK3R6Q5UE93 754 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 LSRQ86X29 649 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-204ENST00000438964 RASAL3Q86YV0 1011 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 SLC44A2Q8IWA5 706 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-204ENST00000438964 CFAP52Q8N1V2 620 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 SVOPLQ8N434 492 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 GLB1L3Q8NCI6 653 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-204ENST00000438964 TSEN34Q9BSV6 310 aaKnown RBP13.08□□□□□ -0.32
ACTN1-204ENST00000438964 TFB2MQ9H5Q4 396 aaKnown RBP13.08□□□□□ -0.32
ACTN1-204ENST00000438964 CATSPERBQ9H7T0 1116 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 MRM3Q9HC36 420 aaKnown RBP13.08□□□□□ -0.32
ACTN1-204ENST00000438964 DCAF13Q9NV06 445 aaKnown RBP13.08□□□□□ -0.32
ACTN1-204ENST00000438964 TAS2R9Q9NYW1 312 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 MUTYHQ9UIF7 546 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 TRIP12Q14669 1992 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-204ENST00000438964 PNMA8CA0A1B0GUJ8 204 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 RGS13O14921 159 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 AREL1O15033 823 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 GPR182O15218 404 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 CNMDO75829 334 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 SEMA3DO95025 777 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 CBLP22681 906 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 RYKP34925 604 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 CA5AP35218 305 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 PRR23CQ6ZRP0 262 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 ENTHD1Q8IYW4 607 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 UTP15Q8TED0 518 aaKnown RBP13.07□□□□□ -0.32
ACTN1-204ENST00000438964 APH1BQ8WW43 257 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 SLC38A4Q969I6 547 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 ST6GAL2Q96JF0 529 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 EGLN2Q96KS0 407 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 ASB2Q96Q27 587 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 SDHCQ99643 169 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-204ENST00000438964 IPPKQ9H8X2 491 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 RPRD1BQ9NQG5 326 aaKnown RBP13.07□□□□□ -0.32
ACTN1-204ENST00000438964 BTBD3Q9Y2F9 522 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 KLHL20Q9Y2M5 609 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 H3BQ06 376 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-204ENST00000438964 M0QX08 132 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 ANKRD28O15084 1053 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 SLC16A6O15403 523 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 IRAK2O43187 625 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 WARSP23381 471 aaKnown RBP13.07□□□□□ -0.32
ACTN1-204ENST00000438964 HTR2BP41595 481 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 SF1Q15637 639 aaKnown RBP13.07□□□□□ -0.32
ACTN1-204ENST00000438964 ERAP2Q6P179 960 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 DOK6Q6PKX4 331 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 LRRTM3Q86VH5 581 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 HORMAD1Q86X24 394 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 MYEOVQ96EZ4 313 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 CDKN2AIPNLQ96HQ2 116 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 MMP27Q9H306 513 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 MIOSQ9NXC5 875 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 RBPJLQ9UBG7 517 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 DKK3Q9UBP4 350 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 TBC1D24Q9ULP9 559 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 PAPPA2Q9BXP8 1791 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 THSD7AQ9UPZ6 1657 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 A0A0X1KG70 313 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 VPS4BO75351 444 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 MED26O95402 600 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 AKT1P31749 480 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 SLC15A1P46059 708 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 MED22Q15528 200 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 UAP1L1Q3KQV9 507 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 PLEKHG6Q3KR16 790 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 ZRANB3Q5FWF4 1079 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 PDE12Q6L8Q7 609 aaKnown RBP13.07□□□□□ -0.32
ACTN1-204ENST00000438964 EFL1Q7Z2Z2 1120 aaKnown RBP13.07□□□□□ -0.32
ACTN1-204ENST00000438964 ABI3BPQ7Z7G0 1075 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 ZNF598Q86UK7 904 aaKnown RBP13.07□□□□□ -0.32
ACTN1-204ENST00000438964 ELMOD2Q8IZ81 293 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 DPP10Q8N608 796 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 OR2B2Q9GZK3 357 aa13.07□□□□□ -0.32
ACTN1-204ENST00000438964 GORASP2Q9H8Y8 452 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms