RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 CPLX4Q7Z7G2 160 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 SYTL1Q8IYJ3 562 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 TEX9Q8N6V9 391 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 TRPC4APQ8TEL6 797 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 RAB11FIP5Q9BXF6 653 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 ILKAPQ9H0C8 392 aaPredicted RBP22.33■■□□□ 1.17
CPSF4-204ENST00000436336 POT1Q9NUX5 634 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 HAO1Q9UJM8 370 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 PLAGL1Q9UM63 463 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.33■■□□□ 1.17
CPSF4-204ENST00000436336 ANGPTL3Q9Y5C1 460 aa22.33■■□□□ 1.17
CPSF4-204ENST00000436336 LMO7DNF2Z398 122 aa22.32■■□□□ 1.16
CPSF4-204ENST00000436336 YY2O15391 372 aa22.32■■□□□ 1.16
CPSF4-204ENST00000436336 CFIP05156 583 aa22.32■■□□□ 1.16
CPSF4-204ENST00000436336 GRIK2Q13002 908 aa22.32■■□□□ 1.16
CPSF4-204ENST00000436336 NAE1Q13564 534 aa22.32■■□□□ 1.16
CPSF4-204ENST00000436336 ZNF423Q2M1K9 1284 aa22.32■■□□□ 1.16
CPSF4-204ENST00000436336 SFRP1Q8N474 314 aa22.32■■□□□ 1.16
CPSF4-204ENST00000436336 OR52E1Q8NGJ3 308 aa22.32■■□□□ 1.16
CPSF4-204ENST00000436336 ZFPM2Q8WW38 1151 aa22.32■■□□□ 1.16
CPSF4-204ENST00000436336 PYCR2Q96C36 320 aa22.32■■□□□ 1.16
CPSF4-204ENST00000436336 GRAMD1AQ96CP6 724 aa22.32■■□□□ 1.16
CPSF4-204ENST00000436336 CAPN10Q9HC96 672 aa22.32■■□□□ 1.16
CPSF4-204ENST00000436336 STK38LQ9Y2H1 464 aa22.32■■□□□ 1.16
CPSF4-204ENST00000436336 CSNK1G3Q9Y6M4 447 aa22.32■■□□□ 1.16
CPSF4-204ENST00000436336 TRBV23OR9-2A0A075B6M9 112 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 E7ENX8 843 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 SDC3O75056 442 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 EPN2O95208 641 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 ANXA6P08133 673 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 EPB42P16452 691 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 TSPAN8P19075 237 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 TAP2Q03519 686 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 LPAL2Q16609 132 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 CYP2A13Q16696 494 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 SLC23A3Q6PIS1 610 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 CUZD1Q86UP6 607 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 TRIM48Q8IWZ4 208 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 LRRC56Q8IYG6 542 aaPredicted RBP22.31■■□□□ 1.16
CPSF4-204ENST00000436336 ZNF781Q8N8C0 355 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 PPFIBP2Q8ND30 876 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 PIWIL2Q8TC59 973 aaKnown RBP22.31■■□□□ 1.16
CPSF4-204ENST00000436336 PATE1Q8WXA2 126 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 MED8Q96G25 268 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 IL17FQ96PD4 163 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 CCT8L2Q96SF2 557 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 FAM107BQ9H098 131 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 DNAJC11Q9NVH1 559 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 SLC6A14Q9UN76 642 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 SLC22A14Q9Y267 594 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 R4GN57 208 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 UBFD1O14562 309 aaKnown RBP22.31■■□□□ 1.16
CPSF4-204ENST00000436336 DFNA5O60443 496 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 KATNA1O75449 491 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 TGDSO95455 350 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 FAM107AO95990 144 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 VIPP01282 170 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 RAB28P51157 221 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 TBPL1P62380 186 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 UBE2IP63279 158 aaKnown RBP22.31■■□□□ 1.16
CPSF4-204ENST00000436336 CAPN13Q6MZZ7 669 aaPredicted RBP22.31■■□□□ 1.16
CPSF4-204ENST00000436336 IL27RAQ6UWB1 636 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 THOC6Q86W42 341 aaKnown RBP22.31■■□□□ 1.16
CPSF4-204ENST00000436336 KIRREL3Q8IZU9 778 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 SLC37A2Q8TED4 501 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 NOL11Q9H8H0 719 aaKnown RBP22.31■■□□□ 1.16
CPSF4-204ENST00000436336 IPPKQ9H8X2 491 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 INTS7Q9NVH2 962 aaKnown RBP22.31■■□□□ 1.16
CPSF4-204ENST00000436336 CPNE7Q9UBL6 633 aa22.31■■□□□ 1.16
CPSF4-204ENST00000436336 PRAMEF33A0A0G2JMD5 474 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 B4DGG1 531 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 CCND1P24385 295 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 SHBQ15464 509 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 RBBP7Q16576 425 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 SLC9B2Q86UD5 537 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 AVL9Q8NBF6 648 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 MAPK15Q8TD08 544 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 AGAP11Q8TF27 550 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 ZNF382Q96SR6 550 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 SGPP1Q9BX95 441 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 SHCBP1LQ9BZQ2 653 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 SLC40A1Q9NP59 571 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 MID1IP1Q9NPA3 183 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 CCDC177Q9NQR7 707 aaPredicted RBP22.3■■□□□ 1.16
CPSF4-204ENST00000436336 UCKL1Q9NWZ5 548 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 RAB23Q9ULC3 237 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 PCDHGA5Q9Y5G8 931 aa22.3■■□□□ 1.16
CPSF4-204ENST00000436336 A0A1B0GTQ1 180 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 PPP6CO00743 305 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 GIPC1O14908 333 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 MPSTP25325 297 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 PKLRP30613 574 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 RPL14P50914 215 aaKnown RBP22.29■■□□□ 1.16
CPSF4-204ENST00000436336 PKNOX1P55347 436 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 SH3BP2P78314 561 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 BNIP3Q12983 259 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 FASTKQ14296 549 aaKnown RBP22.29■■□□□ 1.16
CPSF4-204ENST00000436336 TRIM61Q5EBN2 209 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 CGB2Q6NT52 195 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 RBM12BQ8IXT5 1001 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms