RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 NAE1Q13564 534 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 RPE65Q16518 533 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 SPRED3Q2MJR0 410 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 CDKL4Q5MAI5 379 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 KANK2Q63ZY3 851 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 PMS2CLQ68D20 193 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 SCIMPQ6UWF3 145 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 SUSD1Q6UWL2 747 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 PARGQ86W56 976 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 LONP2Q86WA8 852 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 DCUN1D3Q8IWE4 304 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 SNX31Q8N9S9 440 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 MFSD2AQ8NA29 543 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 OR4F6Q8NGB9 312 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 OR9A1PQ8NGU1 263 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 OR5K2Q8NHB8 316 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 DNASE2BQ8WZ79 361 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 GRAMD1AQ96CP6 724 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 MED8Q96G25 268 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 HIST1H2AHQ96KK5 128 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 C3orf30Q96M34 536 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 CCDC138Q96M89 665 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 FOPNLQ96NB1 174 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 FERD3LQ96RJ6 166 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 ZNF382Q96SR6 550 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 HIST1H2AJQ99878 128 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 H2AFJQ9BTM1 129 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 TRIM54Q9BYV2 358 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 KCNH6Q9H252 994 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 TUBB1Q9H4B7 451 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 XKR8Q9H6D3 395 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 WDR55Q9H6Y2 383 aaPredicted RBP8.62□□□□□ -1.03
SMC6-204ENST00000428868 IPPKQ9H8X2 491 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 FSCN3Q9NQT6 498 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 TMEM74BQ9NUR3 256 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 DNAJC28Q9NX36 388 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 ZNF624Q9P2J8 865 aaPredicted RBP8.62□□□□□ -1.03
SMC6-204ENST00000428868 ACSL5Q9ULC5 683 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 SLC22A14Q9Y267 594 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 BTRCQ9Y297 605 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 ARL2BPQ9Y2Y0 163 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 RNF11Q9Y3C5 154 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 ASXL3Q9C0F0 2248 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 CABIN1Q9Y6J0 2220 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 KCNE1BA0A087WTH5 132 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 CCDC163A0A0D9SF12 145 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 A0A1B0GVT2 93 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 A0A1W2PPV9 198 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 E7ENX8 843 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 E7EQ34 232 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 TLR4O00206 839 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 IFRD1O00458 451 aaPredicted RBP8.61□□□□□ -1.03
SMC6-204ENST00000428868 FFAR3O14843 346 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 AZIN1O14977 448 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 GPR42O15529 346 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 ERGP11308 486 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 MTHFD1P11586 935 aaKnown RBP8.61□□□□□ -1.03
SMC6-204ENST00000428868 CD1EP15812 388 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 JUNDP17535 347 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 CD22P20273 847 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 EPHA3P29320 983 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 PEBP1P30086 187 aaKnown RBP8.61□□□□□ -1.03
SMC6-204ENST00000428868 CCNG1P51959 295 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 PNLIPRP1P54315 467 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 NXPH1P58417 271 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 PLOD1Q02809 727 aaPredicted RBP8.61□□□□□ -1.03
SMC6-204ENST00000428868 TAP2Q03519 686 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 TSTA3Q13630 321 aaPredicted RBP8.61□□□□□ -1.03
SMC6-204ENST00000428868 PTK2BQ14289 1009 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 UAP1L1Q3KQV9 507 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 PLK5Q496M5 336 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 ADNP2Q6IQ32 1131 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 EPGNQ6UW88 154 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 C6orf89Q6UWU4 347 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 GPRIN3Q6ZVF9 776 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 LRRC70Q7Z2Q7 622 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 THOC6Q86W42 341 aaKnown RBP8.61□□□□□ -1.03
SMC6-204ENST00000428868 KLHDC8AQ8IYD2 350 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 TCAIMQ8N3R3 496 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 RNF175Q8N4F7 328 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 CDYL2Q8N8U2 506 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 LINC01555Q8NAE3 123 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 OR56A3Q8NH54 315 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 GPBAR1Q8TDU6 330 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 GAB3Q8WWW8 586 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 SKA1Q96BD8 255 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 MARK4Q96L34 752 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 CAMK1GQ96NX5 476 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 HBEGFQ99075 208 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 TRMOQ9BU70 441 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 SPNS1Q9H2V7 528 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 TRIT1Q9H3H1 467 aaKnown RBP8.61□□□□□ -1.03
SMC6-204ENST00000428868 SLC32A1Q9H598 525 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 DNAJC11Q9NVH1 559 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 TRNAU1APQ9NX07 287 aaKnown RBP8.61□□□□□ -1.03
SMC6-204ENST00000428868 KCNK4Q9NYG8 393 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 TAAR2Q9P1P5 351 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 APOBEC3BQ9UH17 382 aaKnown RBP8.61□□□□□ -1.03
SMC6-204ENST00000428868 ICKQ9UPZ9 632 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms