RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 XKR4Q5GH76 650 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 ATG9BQ674R7 924 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 GPR155Q7Z3F1 870 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 CDH24Q86UP0 819 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 TMEM192Q8IY95 271 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 CPA6Q8N4T0 437 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 FAM83FQ8NEG4 500 aaPredicted RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 FRS2Q8WU20 508 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 TM9SF2Q99805 663 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 QTRT2Q9H974 415 aaKnown RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 ZBTB20Q9HC78 741 aaPredicted RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 PAK6Q9NQU5 681 aaPredicted RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 ELF5Q9UKW6 265 aaPredicted RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 RNF6Q9Y252 685 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 PRRC2AP48634 2157 aaKnown RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 LEUTXA8MZ59 168 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 GFRA2O00451 464 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 TSPAN9O75954 239 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 IGLV3-25P01717 112 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 UROSP10746 265 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 OR2T5Q6IEZ7 315 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 KIAA1324Q6UXG2 1013 aaKnown RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 LRRC8DQ7L1W4 858 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 RAB43Q86YS6 212 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 PYROXD2Q8N2H3 581 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 GPR150Q8NGU9 434 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 OR2T29Q8NH02 315 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 BTN2A2Q8WVV5 523 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 DNASE1L2Q92874 299 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 NEDD4LQ96PU5 975 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 COPS4Q9BT78 406 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 POMKQ9H5K3 350 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 MAN2B2Q9Y2E5 1009 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 M0QYV0 167 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 CD3EAPO15446 510 aaKnown RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 PLA2G10O15496 165 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 OR4F21O95013 312 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 HOXC13P31276 330 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 KRT20P35900 424 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 TUFMP49411 452 aaKnown RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 CRYBA2P53672 197 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 CCNA1P78396 465 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 TRAF3Q13114 568 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 SLC35F1Q5T1Q4 408 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 LRIF1Q5T3J3 769 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 OR4F3Q6IEY1 312 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 C14orf80Q86SX3 495 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 GPAT4Q86UL3 456 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 C1orf52Q8N6N3 182 aaKnown RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 SEPT1Q8WYJ6 367 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 TUBGCP3Q96CW5 907 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 TNIP3Q96KP6 325 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 SORCS2Q96PQ0 1159 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 C17orf62Q9BQA9 187 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 CENPOQ9BU64 300 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 GIMAP4Q9NUV9 329 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 FNIP2Q9P278 1114 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 PKDREJQ9NTG1 2253 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 ELOVL7A1L3X0 281 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 ZNF780AO75290 641 aaPredicted RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 ANXA9O76027 345 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 SCELO95171 688 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 CD4P01730 458 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 DDCP20711 480 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 ALDH4A1P30038 563 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 LAMTOR4Q0VGL1 99 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 ZNF460Q14592 562 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 SCYL2Q6P3W7 929 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 TP53INP2Q8IXH6 220 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 KIAA1143Q96AT1 154 aaPredicted RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 PYCR2Q96C36 320 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 ZNF578Q96N58 590 aaPredicted RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 HDHD5Q9BXW7 423 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 GABARAPL3Q9BY60 117 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.03□□□□□ -1.6
RIF1-203ENST00000428287 RANGRFQ9HD47 186 aaPredicted RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 SERHLQ9NQF3 203 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 SLC25A37Q9NYZ2 338 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 TRMT6Q9UJA5 497 aaKnown RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 C7orf66A4D0T2 115 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 PIP5K1BO14986 540 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 CST1P01037 141 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 ITGB3P05106 788 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 PGRP06401 933 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 CDK1P06493 297 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 GPX2P18283 190 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 GTF2E2P29084 291 aaKnown RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 POLR2JP52435 117 aaKnown RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 SYT16Q17RD7 645 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 ALFQ53S48 1182 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 C10orf62Q5T681 223 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 METAP1DQ6UB28 335 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 TRIM46Q7Z4K8 759 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 RNF130Q86XS8 419 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 PLA2G15Q8NCC3 412 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 C3orf58Q8NDZ4 430 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 APPL2Q8NEU8 664 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 OR2T12Q8NG77 320 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 Q96MT0 163 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 FAM193BQ96PV7 902 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms