RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CTNNB1P35222 781 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 RGS19P49795 217 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 SNTA1Q13424 505 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 MBOAT1Q6ZNC8 495 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 LRRC42Q9Y546 428 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 PSMD10O75832 226 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 MERTKQ12866 999 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 FAM174BQ3ZCQ3 159 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 SMARCD3Q6STE5 483 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 SUN3Q8TAQ9 357 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 LCN9Q8WX39 176 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 FNIP2Q9P278 1114 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 SMIM35A0A1B0GVV1 85 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 CPSF4LA6NMK7 179 aaKnown RBP14.16□□□□□ -0.14
PTPN13-203ENST00000427191 CMC1Q7Z7K0 106 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 OR10A6Q8NH74 314 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 ZNF446Q9NWS9 450 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 REXO2Q9Y3B8 237 aaKnown RBP14.16□□□□□ -0.14
PTPN13-203ENST00000427191 HSPA12AO43301 675 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 PEX2P28328 305 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 CRB2Q5IJ48 1285 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 HDAC2Q92769 488 aaKnown RBP14.16□□□□□ -0.14
PTPN13-203ENST00000427191 FEM1CQ96JP0 617 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 CHIAQ9BZP6 476 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 CD93Q9NPY3 652 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 POLLQ9UGP5 575 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 TMEM150CB9EJG8 249 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 E9PAM4 449 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 TSPAN1O60635 241 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 CBSLP0DN79 551 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 GLDCP23378 1020 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 CBSP35520 551 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 NAE1Q13564 534 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 TMCO2Q7Z6W1 182 aaPredicted RBP14.16□□□□□ -0.14
PTPN13-203ENST00000427191 PROKR2Q8NFJ6 384 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 NINJ1Q92982 152 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 S100PBPQ96BU1 408 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 PIWIL1Q96J94 861 aaKnown RBP14.16□□□□□ -0.14
PTPN13-203ENST00000427191 ADRB2P07550 413 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 GKN3PP0CG01 181 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 RAB39AQ14964 217 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 ABRAXAS2Q15018 415 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 RPL13AP3Q6NVV1 102 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 NUDT13Q86X67 352 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 ELAC1Q9H777 363 aaKnown RBP14.16□□□□□ -0.14
PTPN13-203ENST00000427191 USP29Q9HBJ7 922 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 COMMD3Q9UBI1 195 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 NOX1Q9Y5S8 564 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 AGLP35573 1532 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 DIP2BQ9P265 1576 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 SYN3O14994 580 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 LYPLA2O95372 231 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 IL3P08700 152 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 RPL10P27635 214 aaKnown RBP14.16□□□□□ -0.14
PTPN13-203ENST00000427191 MXD1Q05195 221 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 SLC13A2Q13183 592 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 CACUL1Q86Y37 369 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 HID1Q8IV36 788 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 CEP97Q8IW35 865 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 DUSP26Q9BV47 211 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 FAM83DQ9H4H8 585 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 DEC1Q9P2X7 70 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 RYKP34925 604 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 HSPB3Q12988 150 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 DSG2Q14126 1118 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 SSX6Q7RTT6 188 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 CCDC28AQ8IWP9 274 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 TFB2MQ9H5Q4 396 aaKnown RBP14.16□□□□□ -0.14
PTPN13-203ENST00000427191 UBQLN2Q9UHD9 624 aa14.16□□□□□ -0.14
PTPN13-203ENST00000427191 ANKRD63C9JTQ0 380 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 NEDD8-MDP1E9PL57 170 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 MATN3O15232 486 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 HERV-K104P61576 105 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 RPL7AP62424 266 aaKnown RBP14.15□□□□□ -0.14
PTPN13-203ENST00000427191 TMEM68Q96MH6 324 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 OR6C70A6NIJ9 312 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 ZSCAN5BA6NJL1 495 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 LAG3P18627 525 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 ADRA1BP35368 520 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 AQP4P55087 323 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 SEMA3AQ14563 771 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 GNMTQ14749 295 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 ZMIZ2Q8NF64 920 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 GPR21Q99679 349 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 DCSTAMPQ9H295 470 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 NUFIP1Q9UHK0 495 aaKnown RBP14.15□□□□□ -0.14
PTPN13-203ENST00000427191 TESMINQ9Y4I5 508 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 INSIG1O15503 277 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 CSDE1O75534 798 aaKnown RBP14.15□□□□□ -0.14
PTPN13-203ENST00000427191 CDK14O94921 469 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 DAG1Q14118 895 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 C3orf33Q6P1S2 294 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 LRTOMTQ8WZ04 291 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 FEM1AQ9BSK4 669 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 IL17RBQ9NRM6 502 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 OR1F1O43749 312 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 AGTR1P30556 359 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 CDH13P55290 713 aa14.15□□□□□ -0.14
PTPN13-203ENST00000427191 RPS14P62263 151 aaKnown RBP14.15□□□□□ -0.14
PTPN13-203ENST00000427191 IL10RBQ08334 325 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms