RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 SHC2P98077 582 aa23.68■■□□□ 1.38
VEGFA-209ENST00000425836 DLG1Q12959 904 aa23.68■■□□□ 1.38
VEGFA-209ENST00000425836 FASTKQ14296 549 aaKnown RBP23.68■■□□□ 1.38
VEGFA-209ENST00000425836 ARHGAP19Q14CB8 494 aa23.68■■□□□ 1.38
VEGFA-209ENST00000425836 CACHD1Q5VU97 1274 aa23.68■■□□□ 1.38
VEGFA-209ENST00000425836 PRSS42Q7Z5A4 293 aa23.68■■□□□ 1.38
VEGFA-209ENST00000425836 TAX1BP1Q86VP1 789 aa23.68■■□□□ 1.38
VEGFA-209ENST00000425836 FLVCR1-AS1Q8TAF5 88 aa23.68■■□□□ 1.38
VEGFA-209ENST00000425836 CCDC138Q96M89 665 aa23.68■■□□□ 1.38
VEGFA-209ENST00000425836 OR2A14Q96R47 310 aa23.68■■□□□ 1.38
VEGFA-209ENST00000425836 SEMA5BQ9P283 1151 aa23.68■■□□□ 1.38
VEGFA-209ENST00000425836 NOVA2Q9UNW9 492 aaKnown RBP23.68■■□□□ 1.38
VEGFA-209ENST00000425836 MSRB2Q9Y3D2 182 aa23.68■■□□□ 1.38
VEGFA-209ENST00000425836 UNC13CQ8NB66 2214 aa23.67■■□□□ 1.38
VEGFA-209ENST00000425836 A0A087X1B8 175 aa23.67■■□□□ 1.38
VEGFA-209ENST00000425836 A0A096LPK6 155 aa23.67■■□□□ 1.38
VEGFA-209ENST00000425836 A0A1W2PNU3 283 aaPredicted RBP23.67■■□□□ 1.38
VEGFA-209ENST00000425836 AGRPO00253 132 aa23.67■■□□□ 1.38
VEGFA-209ENST00000425836 HGSO14964 777 aaPredicted RBP23.67■■□□□ 1.38
VEGFA-209ENST00000425836 RASSF9O75901 435 aa23.67■■□□□ 1.38
VEGFA-209ENST00000425836 ENO2P09104 434 aaPredicted RBP23.67■■□□□ 1.38
VEGFA-209ENST00000425836 ANKRD34CP0C6C1 535 aa23.67■■□□□ 1.38
VEGFA-209ENST00000425836 ATP6V0D1P61421 351 aa23.67■■□□□ 1.38
VEGFA-209ENST00000425836 KIR2DS3Q14952 304 aa23.67■■□□□ 1.38
VEGFA-209ENST00000425836 TSNQ15631 228 aaKnown RBP23.67■■□□□ 1.38
VEGFA-209ENST00000425836 PPP1R3AQ16821 1122 aa23.67■■□□□ 1.38
VEGFA-209ENST00000425836 CCDC91Q7Z6B0 441 aa23.67■■□□□ 1.38
VEGFA-209ENST00000425836 TBC1D1Q86TI0 1168 aaPredicted RBP23.67■■□□□ 1.38
VEGFA-209ENST00000425836 OR2W6PQ8NHA6 318 aa23.67■■□□□ 1.38
VEGFA-209ENST00000425836 ZNF480Q8WV37 535 aa23.67■■□□□ 1.38
VEGFA-209ENST00000425836 PPCSQ9HAB8 311 aa23.67■■□□□ 1.38
VEGFA-209ENST00000425836 IGSF5Q9NSI5 407 aa23.67■■□□□ 1.38
VEGFA-209ENST00000425836 CACNA1AO00555 2505 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 IGHV5-51A0A0C4DH38 117 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 TLCD2A6NGC4 264 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 ISM1B1AKI9 464 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 PRICKLE3O43900 615 aaPredicted RBP23.66■■□□□ 1.38
VEGFA-209ENST00000425836 HIST1H2AGP0C0S8 130 aaPredicted RBP23.66■■□□□ 1.38
VEGFA-209ENST00000425836 UGT2B7P16662 529 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 HIST1H2ADP20671 130 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 HSD17B2P37059 387 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 PNLIPRP1P54315 467 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 IRF9Q00978 393 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 TAF1BQ53T94 588 aaPredicted RBP23.66■■□□□ 1.38
VEGFA-209ENST00000425836 FBXO38Q6PIJ6 1188 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 SPESP1Q6UW49 350 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 MBOAT1Q6ZNC8 495 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 TIFABQ6ZNK6 161 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 RAB11FIP2Q7L804 512 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 TDRPQ86YL5 185 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 CENPLQ8N0S6 344 aaPredicted RBP23.66■■□□□ 1.38
VEGFA-209ENST00000425836 MTBPQ96DY7 904 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 HIST1H2AHQ96KK5 128 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 CMKLR1Q99788 373 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 HIST1H2AJQ99878 128 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 H2AFJQ9BTM1 129 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 TRIM54Q9BYV2 358 aa23.66■■□□□ 1.38
VEGFA-209ENST00000425836 ZNF768Q9H5H4 540 aaKnown RBP23.66■■□□□ 1.38
VEGFA-209ENST00000425836 CCDC187A0A096LP49 1063 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 IQANK1A0A1B0GTG1 560 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 A0A1W2PPV9 198 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 LTA4HP09960 611 aaKnown RBP23.65■■□□□ 1.38
VEGFA-209ENST00000425836 IMPA1P29218 277 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 SLCO1A2P46721 670 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 LSSP48449 732 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 ADAMTSL2Q86TH1 951 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 EPS8L3Q8TE67 593 aaKnown RBP23.65■■□□□ 1.38
VEGFA-209ENST00000425836 KCTD4Q8WVF5 259 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 KLHL6Q8WZ60 621 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 PTERQ96BW5 349 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 NXNL1Q96CM4 212 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 PITPNM3Q9BZ71 974 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 VPS11Q9H270 941 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 UTP6Q9NYH9 597 aaKnown RBP23.65■■□□□ 1.38
VEGFA-209ENST00000425836 STOX2Q9P2F5 926 aaPredicted RBP23.65■■□□□ 1.38
VEGFA-209ENST00000425836 TBK1Q9UHD2 729 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 ANGPTL2Q9UKU9 493 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 LOXL2Q9Y4K0 774 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 PMS2P1A4D2B8 440 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 E7ENX8 843 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 RFPL1O75677 317 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 CSTF2P33240 577 aaKnown RBP eCLIP23.65■■□□□ 1.38
VEGFA-209ENST00000425836 SEPHS1P49903 392 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 AP1S2P56377 157 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 TAP2Q03519 686 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 EIF3IQ13347 325 aaKnown RBP23.65■■□□□ 1.38
VEGFA-209ENST00000425836 TRIM73Q86UV7 250 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 LRRC56Q8IYG6 542 aaPredicted RBP23.65■■□□□ 1.38
VEGFA-209ENST00000425836 SYTL1Q8IYJ3 562 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 CARFQ8N187 725 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 PPFIBP2Q8ND30 876 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 AGBL5Q8NDL9 886 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 WDR36Q8NI36 951 aaKnown RBP23.65■■□□□ 1.38
VEGFA-209ENST00000425836 SMPDL3AQ92484 453 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 KIAA1191Q96A73 305 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 SLC22A18Q96BI1 424 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 NMRAL1Q9HBL8 299 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 C1GALT1Q9NS00 363 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 ARL15Q9NXU5 204 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 SATB2Q9UPW6 733 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms