RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 TRBV5-4A0A0C4DH59 114 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 AKR1B15C9JRZ8 316 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 DSCR3O14972 297 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SGTAO43765 313 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 JRKO75564 520 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 WFS1O76024 890 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 USP1O94782 785 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MLYCDO95822 493 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 APOA4P06727 396 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ERVK-10P10266 1014 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ICAM2P13598 275 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 RAB28P51157 221 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ZNF140P52738 457 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 OTUD4Q01804 1114 aaKnown RBP11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 TMED2Q15363 201 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 HIF1AQ16665 826 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 P3H1Q32P28 736 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 VWA2Q5GFL6 755 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CRB2Q5IJ48 1285 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 TMEM207Q6UWW9 146 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 TRIM73Q86UV7 250 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 DNAAF3Q8N9W5 541 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 OR1N1Q8NGS0 311 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ACTL9Q8TC94 416 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MAGEC3Q8TD91 643 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MIEF2Q96C03 454 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 FOPNLQ96NB1 174 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SLC6A20Q9NP91 592 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 UTP6Q9NYH9 597 aaKnown RBP11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MRPS2Q9Y399 296 aaKnown RBP11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 USP9YO00507 2555 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 FLNCQ14315 2725 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 TARM1B6A8C7 271 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MAP2K7O14733 419 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 PCDH17O14917 1159 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 KPNA5O15131 536 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CRYABP02511 175 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MSNP26038 577 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CYLC1P35663 651 aaPredicted RBP11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 RWDD2BP57060 319 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MFAP5Q13361 173 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ART3Q13508 389 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ZXDCQ2QGD7 858 aaPredicted RBP11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 PRMT9Q6P2P2 845 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 IGFL2Q6UWQ7 119 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 FJX1Q86VR8 437 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 KBTBD2Q8IY47 623 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CFAP61Q8NHU2 1237 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 DNAJC1Q96KC8 554 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SELENOSQ9BQE4 189 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CRB3Q9BUF7 120 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 YIPF2Q9BWQ6 316 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 OSBPL8Q9BZF1 889 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SLC26A1Q9H2B4 701 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ZNF304Q9HCX3 659 aa11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ZNF282Q9UDV7 671 aaPredicted RBP11.78□□□□□ -0.52
HLA-DQB3-203ENST00000425319 NSG1A0A0A6YYJ2 146 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 TRAV17A0A0B4J275 112 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PFDN6O15212 129 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ONECUT2O95948 504 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 HPP00738 406 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 UMODP07911 640 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 STSP08842 583 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ACPPP15309 386 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 TPH1P17752 444 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 MAGP20916 626 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CD9P21926 228 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ACADLP28330 430 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 RIPPLY3P57055 190 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 HSPA14Q0VDF9 509 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SPARCL1Q14515 664 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 POU6F1Q14863 301 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 INAQ16352 499 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 NKG7Q16617 165 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 DBN1Q16643 649 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 LONRF1Q17RB8 773 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 FASTKD1Q53R41 847 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 AARS2Q5JTZ9 985 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 C11orf63Q6NUN7 778 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 FIGLAQ6QHK4 219 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 GFRALQ6UXV0 394 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PACS1Q6VY07 963 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 LINC00696Q6ZRV3 163 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 CCDC170Q8IYT3 715 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 DNAJB8Q8NHS0 232 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SKA2Q8WVK7 121 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 RAD51AP1Q96B01 352 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SOX17Q9H6I2 414 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SPHK1Q9NYA1 384 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 IMPACTQ9P2X3 320 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 TEKT2Q9UIF3 430 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 PCDHA3Q9Y5H8 950 aa11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 KLF2Q9Y5W3 355 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ZNF106Q9H2Y7 1883 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 NOTCH2Q04721 2471 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 SLC5A10A0PJK1 596 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 E7EVH7 732 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 ZG16O60844 167 aa11.76□□□□□ -0.53
HLA-DQB3-203ENST00000425319 MFAP3LO75121 409 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms