RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 WDR47O94967 919 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 ANXA5P08758 320 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 BIRC2Q13490 618 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 PLA2G2CQ5R387 149 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 NEK10Q6ZWH5 1172 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 MYLK4Q86YV6 388 aaPredicted RBP13.04□□□□□ -0.32
PRPF39-202ENST00000424478 TEX9Q8N6V9 391 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 ZNF75CPQ92670 426 aaPredicted RBP13.04□□□□□ -0.32
PRPF39-202ENST00000424478 KCNA7Q96RP8 456 aa13.04□□□□□ -0.32
PRPF39-202ENST00000424478 PABPN1LA6NDY0 278 aaKnown RBP13.03□□□□□ -0.32
PRPF39-202ENST00000424478 UBFD1O14562 309 aaKnown RBP13.03□□□□□ -0.32
PRPF39-202ENST00000424478 SIGLEC6O43699 453 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 S100BP04271 92 aaPredicted RBP13.03□□□□□ -0.32
PRPF39-202ENST00000424478 TAC1P20366 129 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 MPSTP25325 297 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 ALDH4A1P30038 563 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 TBPL1P62380 186 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 GNGT1P63211 74 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 MEF2AQ02078 507 aaPredicted RBP13.03□□□□□ -0.32
PRPF39-202ENST00000424478 CCDC157Q569K6 752 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 ZNF678Q5SXM1 525 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 THEMIS2Q5TEJ8 643 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 RNF31Q96EP0 1072 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 OR4K3Q96R72 315 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 TRIM54Q9BYV2 358 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 OGFRQ9NZT2 677 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 PTBP2Q9UKA9 531 aaKnown RBP13.03□□□□□ -0.32
PRPF39-202ENST00000424478 SPTBP11277 2137 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 SYCE1LA8MT33 242 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 PRAMEF10O60809 474 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 TRIM13O60858 407 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 PRKAA2P54646 552 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 ZNF423Q2M1K9 1284 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 LIPMQ5VYY2 423 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 LAIR1Q6GTX8 287 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 UNC5DQ6UXZ4 953 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 CCDC91Q7Z6B0 441 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 TRIM73Q86UV7 250 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 CEP76Q8TAP6 659 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 LCN9Q8WX39 176 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 RSC1A1Q92681 617 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 RAD51AP1Q96B01 352 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 HBEGFQ99075 208 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 MANSC1Q9H8J5 431 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 CNOT10Q9H9A5 744 aaKnown RBP13.03□□□□□ -0.32
PRPF39-202ENST00000424478 ERVMER34-1Q9H9K5 563 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 RDH14Q9HBH5 336 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 NUDT4Q9NZJ9 180 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 NCDNQ9UBB6 729 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 ADAM21Q9UKJ8 722 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 PCOLCE2Q9UKZ9 415 aa13.03□□□□□ -0.32
PRPF39-202ENST00000424478 CPED1A4D0V7 1026 aa13.02□□□□□ -0.32
PRPF39-202ENST00000424478 EIF3FO00303 357 aaPredicted RBP13.02□□□□□ -0.32
PRPF39-202ENST00000424478 BTN3A3O00478 584 aa13.02□□□□□ -0.32
PRPF39-202ENST00000424478 POLR2CP19387 275 aaPredicted RBP13.02□□□□□ -0.32
PRPF39-202ENST00000424478 PLOD1Q02809 727 aaPredicted RBP13.02□□□□□ -0.32
PRPF39-202ENST00000424478 SETDB1Q15047 1291 aa13.02□□□□□ -0.32
PRPF39-202ENST00000424478 TTC23LQ6PF05 361 aa13.02□□□□□ -0.32
PRPF39-202ENST00000424478 KANSL1Q7Z3B3 1105 aa13.02□□□□□ -0.32
PRPF39-202ENST00000424478 TBC1D21Q8IYX1 336 aa13.02□□□□□ -0.32
PRPF39-202ENST00000424478 ARFGAP2Q8N6H7 521 aa13.02□□□□□ -0.32
PRPF39-202ENST00000424478 PDPRQ8NCN5 879 aa13.02□□□□□ -0.32
PRPF39-202ENST00000424478 PPP4R1Q8TF05 950 aa13.02□□□□□ -0.32
PRPF39-202ENST00000424478 GSTO2Q9H4Y5 243 aa13.02□□□□□ -0.32
PRPF39-202ENST00000424478 RNF215Q9Y6U7 377 aa13.02□□□□□ -0.32
PRPF39-202ENST00000424478 E7ENX8 843 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 E2F3O00716 465 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 PRAMEF4O60810 478 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 STATHP02808 62 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 SERPINB3P29508 390 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 ALDH18A1P54886 795 aaKnown RBP13.02□□□□□ -0.33
PRPF39-202ENST00000424478 HERVK_113P63132 956 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 UBE2IP63279 158 aaKnown RBP13.02□□□□□ -0.33
PRPF39-202ENST00000424478 TAP2Q03519 686 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 ILF2Q12905 390 aaKnown RBP13.02□□□□□ -0.33
PRPF39-202ENST00000424478 AMZ1Q400G9 498 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 ARL13AQ5H913 290 aaPredicted RBP13.02□□□□□ -0.33
PRPF39-202ENST00000424478 CFAP157Q5JU67 520 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 TCHHL1Q5QJ38 904 aaPredicted RBP13.02□□□□□ -0.33
PRPF39-202ENST00000424478 PRAMEF9Q5VWM5 478 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 LSMEM2Q8N112 164 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 SNX31Q8N9S9 440 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 MAPK15Q8TD08 544 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 CKAP2Q8WWK9 683 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 ERVK-6Q9BXR3 956 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 SEMA4GQ9NTN9 838 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 KLHL3Q9UH77 587 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 TAC3Q9UHF0 121 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 HEATR5BQ9P2D3 2071 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 FREM2Q5SZK8 3169 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 CCDC189A1A4V9 331 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 OR6C74A6NCV1 312 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 MYO1CO00159 1063 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 EPORP19235 508 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 PEBP1P30086 187 aaKnown RBP13.02□□□□□ -0.33
PRPF39-202ENST00000424478 RXRGP48443 463 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 CCT8P50990 548 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 PNLIPRP1P54315 467 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 FOXA1P55317 472 aa13.02□□□□□ -0.33
PRPF39-202ENST00000424478 SP140Q13342 867 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms