RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 ANXA5P08758 320 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 CKMT2P17540 419 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 HPDP32754 393 aaPredicted RBP15.23■□□□□ 0.03
DDX55-203ENST00000421670 PPM1FP49593 454 aaPredicted RBP15.23■□□□□ 0.03
DDX55-203ENST00000421670 MPP2Q14168 576 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 FASTKQ14296 549 aaKnown RBP15.23■□□□□ 0.03
DDX55-203ENST00000421670 NR1D2Q14995 579 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 ZXDCQ2QGD7 858 aaPredicted RBP15.23■□□□□ 0.03
DDX55-203ENST00000421670 C18orf21Q32NC0 220 aaPredicted RBP15.23■□□□□ 0.03
DDX55-203ENST00000421670 CCDC153Q494R4 210 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 NKAIN2Q5VXU1 208 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 SPRED1Q7Z699 444 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 AMIGO1Q86WK6 493 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 SYTL1Q8IYJ3 562 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 CCDC63Q8NA47 563 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 PDPRQ8NCN5 879 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 ARMC2Q8NEN0 867 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 OR6C4Q8NGE1 309 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 NAT6Q93015 286 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 CCDC3Q9BQI4 270 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 ATG10Q9H0Y0 220 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 SRMSQ9H3Y6 488 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 UCK1Q9HA47 277 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 SSU72Q9NP77 194 aaKnown RBP15.23■□□□□ 0.03
DDX55-203ENST00000421670 KCNK4Q9NYG8 393 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 SPATA7Q9P0W8 599 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 CNOT1A5YKK6 2376 aaKnown RBP15.22■□□□□ 0.03
DDX55-203ENST00000421670 CCDC189A1A4V9 331 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 OR6C74A6NCV1 312 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 HMGB1P1B2RPK0 211 aaPredicted RBP15.22■□□□□ 0.03
DDX55-203ENST00000421670 PRPF4O43172 522 aaKnown RBP eCLIP15.22■□□□□ 0.03
DDX55-203ENST00000421670 KDM1AO60341 852 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 UBXN7O94888 489 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 S100BP04271 92 aaPredicted RBP15.22■□□□□ 0.03
DDX55-203ENST00000421670 ERGP11308 486 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 GFAPP14136 432 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 SHMT2P34897 504 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 DUSP3P51452 185 aaPredicted RBP15.22■□□□□ 0.03
DDX55-203ENST00000421670 PNLIPRP1P54315 467 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 CDKL1Q00532 357 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 TSTA3Q13630 321 aaPredicted RBP15.22■□□□□ 0.03
DDX55-203ENST00000421670 PFKFB4Q16877 469 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 ANKS6Q68DC2 871 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 AGTRAPQ6RW13 159 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 RAB42Q8N4Z0 105 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 DEFB124Q8NES8 71 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 NETO1Q8TDF5 533 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 PYCR2Q96C36 320 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 RHBDF1Q96CC6 855 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 SELENOSQ9BQE4 189 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 RAB11FIP5Q9BXF6 653 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 ABCF3Q9NUQ8 709 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 EVA1BQ9NVM1 165 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 OGFRQ9NZT2 677 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 LNPEPQ9UIQ6 1025 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 HEATR5BQ9P2D3 2071 aa15.22■□□□□ 0.03
DDX55-203ENST00000421670 ADAMTS20P59510 1910 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 IGHV1OR21-1A0A087WYE8 117 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 TMEM120BA0PK00 339 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 H3BQF6 201 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 BTN3A3O00478 584 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 B4GAT1O43505 415 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 ACP1P24666 158 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 GPR3P46089 330 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 CAPZBP47756 277 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 ACADVLP49748 655 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 AGTR2P50052 363 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 PPP1CAP62136 330 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 TBPL1P62380 186 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 CYP2A13Q16696 494 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 AMZ1Q400G9 498 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 SUSD1Q6UWL2 747 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 ADGRF3Q8IZF5 1079 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 FBXO39Q8N4B4 442 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 ANKRD42Q8N9B4 389 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 OR2L8Q8NGY9 312 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 ESAMQ96AP7 390 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 FBXL8Q96CD0 374 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 PHF21BQ96EK2 531 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 MED8Q96G25 268 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 CDC6Q99741 560 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 TMEM79Q9BSE2 394 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 MLXIPLQ9NP71 852 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 SPHK1Q9NYA1 384 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 WWOXQ9NZC7 414 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 ASB1Q9Y576 335 aa15.21■□□□□ 0.03
DDX55-203ENST00000421670 GSAPA4D1B5 854 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 A8MT66 165 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 E7ENX8 843 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 G3V2L1 256 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 TAPBPO15533 448 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 SMIM24O75264 130 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 PROS1P07225 676 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 CHRM5P08912 532 aaPredicted RBP15.2■□□□□ 0.02
DDX55-203ENST00000421670 PNLIPP16233 465 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 AMD1P17707 334 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 POLR2CP19387 275 aaPredicted RBP15.2■□□□□ 0.02
DDX55-203ENST00000421670 PSMB5P28074 263 aa15.2■□□□□ 0.02
DDX55-203ENST00000421670 PEBP1P30086 187 aaKnown RBP15.2■□□□□ 0.02
DDX55-203ENST00000421670 EPHA4P54764 986 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms