RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 RPP14O95059 124 aaKnown RBP11.81□□□□□ -0.52
UBR4-205ENST00000417040 AHCYP23526 432 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 CDH4P55283 916 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 TMEM192Q8IY95 271 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 TOMM5Q8N4H5 51 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 PAK6Q9NQU5 681 aaPredicted RBP11.81□□□□□ -0.52
UBR4-205ENST00000417040 SACM1LQ9NTJ5 587 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 C2orf92A0A1B0GVN3 265 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 ALAS2P22557 587 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 ACSL1P33121 698 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 OGFRL1Q5TC84 451 aaPredicted RBP11.81□□□□□ -0.52
UBR4-205ENST00000417040 NCBP2-AS2Q69YL0 99 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 RAB12Q6IQ22 244 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 HMBOX1Q6NT76 420 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 C6orf89Q6UWU4 347 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 LGI4Q8N135 537 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 AKAP1Q92667 903 aaKnown RBP eCLIP11.81□□□□□ -0.52
UBR4-205ENST00000417040 LRRC72A6NJI9 287 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 CXCL11O14625 94 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 LHCGRP22888 699 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 DDX6P26196 483 aaKnown RBP eCLIP11.81□□□□□ -0.52
UBR4-205ENST00000417040 CD40LGP29965 261 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 DNAJA1P31689 397 aaKnown RBP11.81□□□□□ -0.52
UBR4-205ENST00000417040 PTGES3Q15185 160 aaKnown RBP11.81□□□□□ -0.52
UBR4-205ENST00000417040 USF2Q15853 346 aaPredicted RBP11.81□□□□□ -0.52
UBR4-205ENST00000417040 ANKDD1AQ495B1 522 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 NFKBIDQ8NI38 313 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 CEP76Q8TAP6 659 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 RCOR3Q9P2K3 495 aaPredicted RBP11.81□□□□□ -0.52
UBR4-205ENST00000417040 FBXL3Q9UKT7 428 aa11.81□□□□□ -0.52
UBR4-205ENST00000417040 ARHGEF28Q8N1W1 1705 aaKnown RBP11.8□□□□□ -0.52
UBR4-205ENST00000417040 WRBO00258 174 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 PGAM2P15259 253 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 FNTBP49356 437 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 VLDLRP98155 873 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 DSC3Q14574 896 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 MYLK3Q32MK0 819 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 HID1Q8IV36 788 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 SLC35G5Q96KT7 338 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 SLC35A5Q9BS91 424 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 COMMD4Q9H0A8 199 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 POLR2J3Q9H1A7 115 aaKnown RBP11.8□□□□□ -0.52
UBR4-205ENST00000417040 LRRC42Q9Y546 428 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 TCHHQ07283 1943 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 MEN1O00255 615 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 PER2O15055 1255 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 CDK14O94921 469 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 TGFB1P01137 390 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 IFNA7P01567 189 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 KCNA5P22460 613 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 SLC15A1P46059 708 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 PGGT1BP53609 377 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 PCLAFQ15004 111 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 GPR142Q7Z601 462 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 ZNF641Q96N77 438 aaPredicted RBP11.8□□□□□ -0.52
UBR4-205ENST00000417040 FTHL17Q9BXU8 183 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 TBC1D3DA0A087WVF3 549 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 TBC1D3IA0A087WXS9 549 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 TBC1D3EA0A087X179 549 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 TBC1D3KA0A087X1G2 549 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 TBC1D3FA6NER0 549 aaPredicted RBP11.8□□□□□ -0.52
UBR4-205ENST00000417040 TBC1D3LB9A6J9 549 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 H0YGN5 161 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 HLA-DQB2P05538 268 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 TBC1D3HP0C7X1 549 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 FSHRP23945 695 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 ARL2P36404 184 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 SLC10A7Q0GE19 358 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 GRSF1Q12849 480 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBR4-205ENST00000417040 PUM1Q14671 1186 aaKnown RBP eCLIP11.8□□□□□ -0.521e-9■□□□□ 8.5
UBR4-205ENST00000417040 TBRG1Q3YBR2 411 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 TBC1D3GQ6DHY5 549 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 SMYD5Q6GMV2 418 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 TBC1D3CQ6IPX1 549 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 FAM92BQ6ZTR7 304 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 TBC1D3Q8IZP1 549 aaPredicted RBP11.8□□□□□ -0.52
UBR4-205ENST00000417040 KLHL36Q8N4N3 616 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 FCGR1BQ92637 280 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 COQ3Q9NZJ6 369 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 CNTN3Q9P232 1028 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 NFS1Q9Y697 457 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 DLX3O60479 287 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 GSTT2BP0CG30 244 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 EDNRAP25101 427 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 NCBP2P52298 156 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBR4-205ENST00000417040 HEPACAMQ14CZ8 416 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 SOWAHAQ2M3V2 549 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 KLHL22Q53GT1 634 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 RBM20Q5T481 1227 aaKnown RBP11.8□□□□□ -0.52
UBR4-205ENST00000417040 SYPL2Q5VXT5 272 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 MBLAC2Q68D91 279 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 SLC8B1Q6J4K2 584 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 SNX20Q7Z614 316 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 SCAMP5Q8TAC9 235 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 GAL3ST3Q96A11 431 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 RIPOR3Q96MK2 946 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 ZBTB26Q9HCK0 441 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 FKBP14Q9NWM8 211 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 UPB1Q9UBR1 384 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 DNAJB4Q9UDY4 337 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms