RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 PIANPQ8IYJ0 282 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 SLC34A3Q8N130 599 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 OTUD6BQ8N6M0 293 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 ST6GALNAC3Q8NDV1 305 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 ELMO1Q92556 727 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 PEX13Q92968 403 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 IP6K3Q96PC2 410 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 DPH2Q9BQC3 489 aaPredicted RBP12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 UNKQ9C0B0 810 aaKnown RBP12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 IL22Q9GZX6 179 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 SRMSQ9H3Y6 488 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 COG4Q9H9E3 785 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 EIF2B3Q9NR50 452 aaKnown RBP12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 CHRAC1Q9NRG0 131 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 TRMT1Q9NXH9 659 aaKnown RBP12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 SERTAD3Q9UJW9 196 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 PTRH2Q9Y3E5 179 aaKnown RBP12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 TCAF1Q9Y4C2 921 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 CSAG2Q9Y5P2 127 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 PIKFYVEQ9Y2I7 2098 aa12.77□□□□□ -0.37
CTHRC1-202ENST00000415886 IGLV3-16A0A075B6K0 115 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 GOLGA6L10A0A0M3HER8 536 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 OR51F1A6NGY5 319 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 MATN2O00339 956 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 PEX12O00623 359 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 LIN7AO14910 233 aaPredicted RBP12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 PFDN6O15212 129 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 LRRTM2O43300 516 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 HNRNPRO43390 633 aaKnown RBP12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 SGTAO43765 313 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 KDM1AO60341 852 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 KRT14P02533 472 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 CBSLP0DN79 551 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 CBSP35520 551 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 FOLR3P41439 243 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 VPS41P49754 854 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 GPS1Q13098 491 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 BRD3Q15059 726 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 C1orf189Q5VU69 101 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 SDCCAG8Q86SQ7 713 aaPredicted RBP12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 HOOK3Q86VS8 718 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 ZADH2Q8N4Q0 377 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 PRELID2Q8N945 189 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 PHC3Q8NDX5 983 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 ACVR1CQ8NER5 493 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 GSDMBQ8TAX9 411 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 LCN9Q8WX39 176 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 TM9SF4Q92544 642 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 TFGQ92734 400 aaPredicted RBP12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 MS4A14Q96JA4 679 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 TRAPPC9Q96Q05 1148 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 AP1M1Q9BXS5 423 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 PITPNM3Q9BZ71 974 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 MVB12BQ9H7P6 319 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 P4HTMQ9NXG6 502 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 SLC2A6Q9UGQ3 507 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 TTC7AQ9ULT0 858 aaPredicted RBP12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 ENTPD4Q9Y227 616 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 TEP1Q99973 2627 aaKnown RBP12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 SPTBP11277 2137 aa12.76□□□□□ -0.37
CTHRC1-202ENST00000415886 PGRMC1O00264 195 aaKnown RBP12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 E2F3O00716 465 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 CD3EAPO15446 510 aaKnown RBP12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 CNOT3O75175 753 aaKnown RBP12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 NDUFS3O75489 264 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 IPO13O94829 963 aaKnown RBP12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 HBQ1P09105 142 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 PSMA3P25788 255 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 NAA30Q147X3 362 aaPredicted RBP12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 SLC9A5Q14940 896 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 ZRSR2Q15696 482 aaKnown RBP12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 DEFB110Q30KQ9 67 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 CASC4Q6P4E1 433 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 CCDC137Q6PK04 289 aaKnown RBP12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 PACS1Q6VY07 963 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 KCNMB4Q86W47 210 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 SLC35F6Q8N357 371 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 RASGEF1CQ8N431 466 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 OR13J1Q8NGT2 312 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 CSMD1Q96PZ7 3565 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 CELSR2Q9HCU4 2923 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 AGPAT4Q9NRZ5 378 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 CATSPERZQ9NTU4 200 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 SAMD15Q9P1V8 674 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 GPN3Q9UHW5 284 aaPredicted RBP12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 NOVA2Q9UNW9 492 aaKnown RBP12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 CDYLQ9Y232 598 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 OSGIN2Q9Y236 505 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 ASF1AQ9Y294 204 aa12.75□□□□□ -0.37
CTHRC1-202ENST00000415886 MAGEB16A2A368 324 aa12.74□□□□□ -0.37
CTHRC1-202ENST00000415886 HCRTR1O43613 425 aa12.74□□□□□ -0.37
CTHRC1-202ENST00000415886 KLHL41O60662 606 aa12.74□□□□□ -0.37
CTHRC1-202ENST00000415886 ZG16O60844 167 aa12.74□□□□□ -0.37
CTHRC1-202ENST00000415886 CTSBP07858 339 aa12.74□□□□□ -0.37
CTHRC1-202ENST00000415886 PAMP19021 973 aa12.74□□□□□ -0.37
CTHRC1-202ENST00000415886 MGAT1P26572 445 aa12.74□□□□□ -0.37
CTHRC1-202ENST00000415886 GRNP28799 593 aaKnown RBP12.74□□□□□ -0.37
CTHRC1-202ENST00000415886 PDHA2P29803 388 aa12.74□□□□□ -0.37
CTHRC1-202ENST00000415886 FOXN2P32314 431 aa12.74□□□□□ -0.37
CTHRC1-202ENST00000415886 COILP38432 576 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms