RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 PACS1Q6VY07 963 aa14.78□□□□□ -0.04
DDX56-202ENST00000415758 TTLL10Q6ZVT0 673 aa14.78□□□□□ -0.04
DDX56-202ENST00000415758 COX15Q7KZN9 410 aa14.78□□□□□ -0.04
DDX56-202ENST00000415758 TAS2R42Q7RTR8 314 aa14.78□□□□□ -0.04
DDX56-202ENST00000415758 CCDC50Q8IVM0 306 aa14.78□□□□□ -0.04
DDX56-202ENST00000415758 MCATQ8IVS2 390 aaKnown RBP14.78□□□□□ -0.04
DDX56-202ENST00000415758 RELTQ969Z4 430 aa14.78□□□□□ -0.04
DDX56-202ENST00000415758 TBL1YQ9BQ87 522 aa14.78□□□□□ -0.04
DDX56-202ENST00000415758 TRIM56Q9BRZ2 755 aaKnown RBP14.78□□□□□ -0.04
DDX56-202ENST00000415758 UNKQ9C0B0 810 aaKnown RBP14.78□□□□□ -0.04
DDX56-202ENST00000415758 GOLPH3Q9H4A6 298 aa14.78□□□□□ -0.04
DDX56-202ENST00000415758 EPS8L2Q9H6S3 715 aa14.78□□□□□ -0.04
DDX56-202ENST00000415758 RUBCNLQ9H714 662 aa14.78□□□□□ -0.04
DDX56-202ENST00000415758 LUC7LQ9NQ29 371 aaKnown RBP14.78□□□□□ -0.04
DDX56-202ENST00000415758 IGSF5Q9NSI5 407 aa14.78□□□□□ -0.04
DDX56-202ENST00000415758 IRAK4Q9NWZ3 460 aa14.78□□□□□ -0.04
DDX56-202ENST00000415758 NXT1Q9UKK6 140 aaKnown RBP14.78□□□□□ -0.04
DDX56-202ENST00000415758 TDRKHQ9Y2W6 561 aaKnown RBP14.78□□□□□ -0.04
DDX56-202ENST00000415758 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.78□□□□□ -0.04
DDX56-202ENST00000415758 PRSS21Q9Y6M0 314 aa14.78□□□□□ -0.04
DDX56-202ENST00000415758 POLQO75417 2590 aa14.78□□□□□ -0.04
DDX56-202ENST00000415758 MYO7BQ6PIF6 2116 aa14.77□□□□□ -0.04
DDX56-202ENST00000415758 DSCR3O14972 297 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 ALOX12BO75342 701 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 FTH1P02794 183 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 ATXN8OSP0DMR3 200 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 MAGP20916 626 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 MARCKSL1P49006 195 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 OTUD4Q01804 1114 aaKnown RBP14.77□□□□□ -0.05
DDX56-202ENST00000415758 TUBB8Q3ZCM7 444 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 KCTD11Q693B1 232 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 ZNF324BQ6AW86 544 aaPredicted RBP14.77□□□□□ -0.05
DDX56-202ENST00000415758 ISLR2Q6UXK2 745 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 CDKL3Q8IVW4 592 aaPredicted RBP14.77□□□□□ -0.05
DDX56-202ENST00000415758 BCORP1Q8N888 145 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 OR11G2Q8NGC1 345 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 ACTL9Q8TC94 416 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 STYXQ8WUJ0 223 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 ELMO1Q92556 727 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 LRRC45Q96CN5 670 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 VPS50Q96JG6 964 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 SPATA13Q96N96 652 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 ZNF285Q96NJ3 590 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 SEMA3GQ9NS98 782 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 SMARCAL1Q9NZC9 954 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 IL1RAPL1Q9NZN1 696 aa14.77□□□□□ -0.05
DDX56-202ENST00000415758 CCDC78A2IDD5 438 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 VSTM2BA6NLU5 285 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 PRSS44E7EML9 344 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 KCNN4O15554 427 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 MFAP3LO75121 409 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 STK10O94804 968 aaKnown RBP14.76□□□□□ -0.05
DDX56-202ENST00000415758 RBP3P10745 1247 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 RAB28P51157 221 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 RIPPLY3P57055 190 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 Q0VFX4 171 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 MFAP5Q13361 173 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 ART3Q13508 389 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 SPARCL1Q14515 664 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 ZC3H12BQ5HYM0 836 aaKnown RBP14.76□□□□□ -0.05
DDX56-202ENST00000415758 TCTE1Q5JU00 501 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 FAM180AQ6UWF9 173 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 MICALCLQ6ZW33 695 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 MCEMP1Q8IX19 187 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 PARP9Q8IXQ6 854 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 LINC01555Q8NAE3 123 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 CCDC110Q8TBZ0 833 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 KRT35Q92764 455 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 SLC22A18Q96BI1 424 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 THOC3Q96J01 351 aaKnown RBP14.76□□□□□ -0.05
DDX56-202ENST00000415758 MENTQ9BUN1 341 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 CUTCQ9NTM9 273 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 COPG2Q9UBF2 871 aa14.76□□□□□ -0.05
DDX56-202ENST00000415758 FITM1A5D6W6 292 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 MROH6A6NGR9 719 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 JRKO75564 520 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 ZNF189O75820 626 aaPredicted RBP14.75□□□□□ -0.05
DDX56-202ENST00000415758 KLHL18O94889 574 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 TPM1P09493 284 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 PKLRP30613 574 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 PTPN7P35236 360 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 EIF3EP60228 445 aaKnown RBP14.75□□□□□ -0.05
DDX56-202ENST00000415758 GRM7Q14831 915 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 BRD3Q15059 726 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 DNAJC21Q5F1R6 531 aaKnown RBP14.75□□□□□ -0.05
DDX56-202ENST00000415758 CCDC181Q5TID7 509 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 C11orf63Q6NUN7 778 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 FJX1Q86VR8 437 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 FAM20CQ8IXL6 584 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 CATSPER1Q8NEC5 780 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 CNDP1Q96KN2 507 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 OLAHQ9NV23 265 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 PLAGL1Q9UM63 463 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 KLHL20Q9Y2M5 609 aa14.75□□□□□ -0.05
DDX56-202ENST00000415758 KLF2Q9Y5W3 355 aaPredicted RBP14.75□□□□□ -0.05
DDX56-202ENST00000415758 C2CD3Q4AC94 2353 aa14.74□□□□□ -0.05
DDX56-202ENST00000415758 PCDH17O14917 1159 aa14.74□□□□□ -0.05
DDX56-202ENST00000415758 S1PR4O95977 384 aa14.74□□□□□ -0.05
DDX56-202ENST00000415758 HPP00738 406 aa14.74□□□□□ -0.05
DDX56-202ENST00000415758 OR56A5P0C7T3 313 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms