RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 MCM3P25205 808 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 PKLRP30613 574 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 PTPN7P35236 360 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 ARSFP54793 590 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 PLOD1Q02809 727 aaPredicted RBP18.56■□□□□ 0.56
UBXN4-202ENST00000415164 CDC16Q13042 620 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 RBBP7Q16576 425 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 AGAP7PQ5VUJ5 663 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 KCTD11Q693B1 232 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 SRRM1Q8IYB3 904 aaKnown RBP18.56■□□□□ 0.56
UBXN4-202ENST00000415164 CCDC170Q8IYT3 715 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 ST6GALNAC3Q8NDV1 305 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 OR52K1Q8NGK4 314 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 ALG3Q92685 438 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 AGAP4Q96P64 663 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 TTC1Q99614 292 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 TRIM5Q9C035 493 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 CHRNA10Q9GZZ6 450 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 SLC22A11Q9NSA0 550 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 DUSP10Q9Y6W6 482 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 HIVEP3Q5T1R4 2406 aa18.56■□□□□ 0.56
UBXN4-202ENST00000415164 F8W8V4 182 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 LRRTM2O43300 516 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 ZNF189O75820 626 aaPredicted RBP18.55■□□□□ 0.56
UBXN4-202ENST00000415164 IPO7O95373 1038 aaKnown RBP18.55■□□□□ 0.56
UBXN4-202ENST00000415164 GAS8O95995 478 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 PTMSP20962 102 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 MMP11P24347 488 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 FOXN2P32314 431 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 RAB28P51157 221 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 GDF10P55107 478 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 SF1Q15637 639 aaKnown RBP18.55■□□□□ 0.56
UBXN4-202ENST00000415164 P3H1Q32P28 736 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 PACS1Q6VY07 963 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 LINC00696Q6ZRV3 163 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 TTC29Q8NA56 475 aaPredicted RBP18.55■□□□□ 0.56
UBXN4-202ENST00000415164 GRHL3Q8TE85 626 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 EPS8L2Q9H6S3 715 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 CUTCQ9NTM9 273 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 INTS7Q9NVH2 962 aaKnown RBP18.55■□□□□ 0.56
UBXN4-202ENST00000415164 SLC39A10Q9ULF5 831 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 MAU2Q9Y6X3 613 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 CREBBPQ92793 2442 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 SEC16AO15027 2179 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 CACNA1DQ01668 2161 aa18.55■□□□□ 0.56
UBXN4-202ENST00000415164 RCCD1A6NED2 376 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 SOCS6O14544 535 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 PSMD3O43242 534 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 GOT2P00505 430 aaKnown RBP18.54■□□□□ 0.56
UBXN4-202ENST00000415164 ITGAXP20702 1163 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 OR1D4P47884 311 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 SOX8P57073 446 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 NKG7Q16617 165 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 TUBB8Q3ZCM7 444 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 DNAJC21Q5F1R6 531 aaKnown RBP18.54■□□□□ 0.56
UBXN4-202ENST00000415164 CRB2Q5IJ48 1285 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 PPP1R21Q6ZMI0 780 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 OVCH1Q7RTY7 1134 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 KCNMB4Q86W47 210 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 VRK3Q8IV63 474 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 PRSS58Q8IYP2 241 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 OR6P1Q8NGX9 317 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 DENND1AQ8TEH3 1009 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 PPP4R1Q8TF05 950 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 SKA2Q8WVK7 121 aaPredicted RBP18.54■□□□□ 0.56
UBXN4-202ENST00000415164 HDAC10Q969S8 669 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 FKBP10Q96AY3 582 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 THOC3Q96J01 351 aaKnown RBP18.54■□□□□ 0.56
UBXN4-202ENST00000415164 MAGEB10Q96LZ2 347 aaPredicted RBP18.54■□□□□ 0.56
UBXN4-202ENST00000415164 SELENOSQ9BQE4 189 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 TMEM121Q9BTD3 319 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 TSSK1BQ9BXA7 367 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 CTSFQ9UBX1 484 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 SLC2A6Q9UGQ3 507 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 DOPEY1Q5JWR5 2465 aa18.54■□□□□ 0.56
UBXN4-202ENST00000415164 FER1L5A0AVI2 2057 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 ARHGAP10A1A4S6 786 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 MROH6A6NGR9 719 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 SOWAHDA6NJG2 315 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 IQCF5A8MTL0 148 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 DSCR3O14972 297 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 RPN2P04844 631 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 UQCRHP07919 91 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 CD9P21926 228 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 CCR7P32248 378 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 PER3P56645 1201 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 ZNF169Q14929 603 aaPredicted RBP18.53■□□□□ 0.56
UBXN4-202ENST00000415164 ZC3H12BQ5HYM0 836 aaKnown RBP18.53■□□□□ 0.56
UBXN4-202ENST00000415164 FIGLAQ6QHK4 219 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 AFTPHQ6ULP2 937 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 LINC00523Q86TU6 105 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 KLHDC8BQ8IXV7 354 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 DTWD1Q8N5C7 304 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 LINC01555Q8NAE3 123 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 SLC22A18Q96BI1 424 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 LHPPQ9H008 270 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 PACSIN2Q9UNF0 486 aaPredicted RBP18.53■□□□□ 0.56
UBXN4-202ENST00000415164 HS3ST3B1Q9Y662 390 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 CENPEQ02224 2701 aa18.53■□□□□ 0.56
UBXN4-202ENST00000415164 CCDC88CQ9P219 2028 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms