RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 SLCO2A1Q92959 643 aa25.37■■□□□ 1.65
VEGFA-207ENST00000413642 PWWP2AQ96N64 755 aa25.37■■□□□ 1.65
VEGFA-207ENST00000413642 NAPGQ99747 312 aaPredicted RBP25.37■■□□□ 1.65
VEGFA-207ENST00000413642 SLC39A10Q9ULF5 831 aa25.37■■□□□ 1.65
VEGFA-207ENST00000413642 C21orf140B9A014 251 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 H3BMM5 538 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 ZNF749O43361 778 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 PLA2G2AP14555 144 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 MAGP20916 626 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 MPP1Q00013 466 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 DHX9Q08211 1270 aaKnown RBP25.36■■□□□ 1.65
VEGFA-207ENST00000413642 LONRF1Q17RB8 773 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 ZNF517Q6ZMY9 492 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-207ENST00000413642 DNAJC22Q8N4W6 341 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 DENND1AQ8TEH3 1009 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 RAD51AP1Q96B01 352 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 LRFN5Q96NI6 719 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 STARD5Q9NSY2 213 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 INTS10Q9NVR2 710 aaKnown RBP25.36■■□□□ 1.65
VEGFA-207ENST00000413642 MED16Q9Y2X0 877 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 SAR1BQ9Y6B6 198 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 FAM169AQ9Y6X4 670 aa25.36■■□□□ 1.65
VEGFA-207ENST00000413642 E7EQ34 232 aa25.35■■□□□ 1.65
VEGFA-207ENST00000413642 H3BMH7 237 aa25.35■■□□□ 1.65
VEGFA-207ENST00000413642 KLK3P07288 261 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-207ENST00000413642 ATXN8OSP0DMR3 200 aa25.35■■□□□ 1.65
VEGFA-207ENST00000413642 PTPN4P29074 926 aa25.35■■□□□ 1.65
VEGFA-207ENST00000413642 KCNAB2Q13303 367 aa25.35■■□□□ 1.65
VEGFA-207ENST00000413642 HSP90AA5PQ58FG0 334 aa25.35■■□□□ 1.65
VEGFA-207ENST00000413642 TTC23LQ6PF05 361 aa25.35■■□□□ 1.65
VEGFA-207ENST00000413642 IGDCC3Q8IVU1 814 aa25.35■■□□□ 1.65
VEGFA-207ENST00000413642 GIMAP7Q8NHV1 300 aa25.35■■□□□ 1.65
VEGFA-207ENST00000413642 N4BP2L2Q92802 583 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-207ENST00000413642 TRIM51Q9BSJ1 452 aa25.35■■□□□ 1.65
VEGFA-207ENST00000413642 IARS2Q9NSE4 1012 aaKnown RBP25.35■■□□□ 1.65
VEGFA-207ENST00000413642 FARSAQ9Y285 508 aaKnown RBP25.35■■□□□ 1.65
VEGFA-207ENST00000413642 KALRNO60229 2985 aa25.34■■□□□ 1.65
VEGFA-207ENST00000413642 E5RI56 91 aa25.34■■□□□ 1.65
VEGFA-207ENST00000413642 OR2B3O76000 313 aa25.34■■□□□ 1.65
VEGFA-207ENST00000413642 HAUS5O94927 633 aa25.34■■□□□ 1.65
VEGFA-207ENST00000413642 MATN4O95460 622 aa25.34■■□□□ 1.65
VEGFA-207ENST00000413642 CLCN7P51798 805 aa25.34■■□□□ 1.65
VEGFA-207ENST00000413642 RPS15P62841 145 aaKnown RBP25.34■■□□□ 1.65
VEGFA-207ENST00000413642 HP1BP3Q5SSJ5 553 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-207ENST00000413642 SYTL1Q8IYJ3 562 aa25.34■■□□□ 1.65
VEGFA-207ENST00000413642 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.34■■□□□ 1.656e-6■■■■■ 47.7
VEGFA-207ENST00000413642 APOBEC4Q8WW27 367 aaKnown RBP25.34■■□□□ 1.65
VEGFA-207ENST00000413642 GPR87Q9BY21 358 aa25.34■■□□□ 1.65
VEGFA-207ENST00000413642 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-207ENST00000413642 FBXO5Q9UKT4 447 aa25.34■■□□□ 1.65
VEGFA-207ENST00000413642 KCNMB2Q9Y691 235 aa25.34■■□□□ 1.65
VEGFA-207ENST00000413642 PRICKLE3O43900 615 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-207ENST00000413642 CAPN1P07384 714 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 ERVK-10P10266 1014 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 PGAM1P18669 254 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 PSMB5P28074 263 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 GRIA3P42263 894 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 CUL1Q13616 776 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 IL10RAQ13651 578 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 SF1Q15637 639 aaKnown RBP25.33■■□□□ 1.65
VEGFA-207ENST00000413642 KLHL38Q2WGJ6 581 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 BBS9Q3SYG4 887 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.33■■□□□ 1.65
VEGFA-207ENST00000413642 FCRL6Q6DN72 434 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 C17orf53Q8N3J3 647 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-207ENST00000413642 ENDOVQ8N8Q3 282 aaKnown RBP25.33■■□□□ 1.65
VEGFA-207ENST00000413642 FOPNLQ96NB1 174 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 SLC7A5P2Q9GIP4 190 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 CHRNA10Q9GZZ6 450 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 SLC25A18Q9H1K4 315 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 ADNPQ9H2P0 1102 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 PIEZO2Q9H5I5 2752 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 VPS9D1Q9Y2B5 631 aa25.33■■□□□ 1.65
VEGFA-207ENST00000413642 ARHGEF33A8MVX0 844 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 PYCARD-AS1I3L0S3 204 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 CBSLP0DN79 551 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 SFTPCP11686 197 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 ATP5DP30049 168 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 CBSP35520 551 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 DR1Q01658 176 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 FASTKQ14296 549 aaKnown RBP25.32■■□□□ 1.64
VEGFA-207ENST00000413642 CRYMQ14894 314 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 C1orf189Q5VU69 101 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 ZNF385CQ66K41 422 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-207ENST00000413642 FAM198BQ6UWH4 519 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 KCNMB4Q86W47 210 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 GPR135Q8IZ08 494 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 ZNF655Q8N720 491 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-207ENST00000413642 EBNA1BP2Q99848 306 aaKnown RBP25.32■■□□□ 1.64
VEGFA-207ENST00000413642 PLAC1Q9HBJ0 212 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 PLCL2Q9UPR0 1127 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 POLHQ9Y253 713 aa25.32■■□□□ 1.64
VEGFA-207ENST00000413642 FASNP49327 2511 aaKnown RBP25.32■■□□□ 1.64
VEGFA-207ENST00000413642 TTI1O43156 1089 aa25.31■■□□□ 1.64
VEGFA-207ENST00000413642 YBX1P67809 324 aaKnown RBP25.31■■□□□ 1.64
VEGFA-207ENST00000413642 MRPS25P82663 173 aaKnown RBP25.31■■□□□ 1.64
VEGFA-207ENST00000413642 PCGF5Q86SE9 256 aa25.31■■□□□ 1.64
VEGFA-207ENST00000413642 MCATQ8IVS2 390 aaKnown RBP25.31■■□□□ 1.64
VEGFA-207ENST00000413642 SLC22A18Q96BI1 424 aa25.31■■□□□ 1.64
VEGFA-207ENST00000413642 ZNF71Q9NQZ8 489 aaPredicted RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms