RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 RGS4P49798 205 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 PSME3P61289 254 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 UBE3AQ05086 875 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 GRB7Q14451 532 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 RBBP7Q16576 425 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 CCNJQ5T5M9 372 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 LRRC66Q68CR7 880 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 SBSNQ6UWP8 590 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 CCBE1Q6UXH8 406 aaPredicted RBP12.72□□□□□ -0.37
LITAF-203ENST00000413364 GPRIN3Q6ZVF9 776 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.72□□□□□ -0.37
LITAF-203ENST00000413364 CLDN19Q8N6F1 224 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 HIPK4Q8NE63 616 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 PHOSPHO2Q8TCD6 241 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 TUBGCP3Q96CW5 907 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 ERLEC1Q96DZ1 483 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 ASIC4Q96FT7 647 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 METTL2AQ96IZ6 378 aaKnown RBP12.72□□□□□ -0.37
LITAF-203ENST00000413364 CEP19Q96LK0 163 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 ZNF382Q96SR6 550 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 SP140LQ9H930 580 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 ASB1Q9Y576 335 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 PCDHGA7Q9Y5G6 932 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 DOCK6Q96HP0 2047 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 A0A1W2PPW3 197 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 A8MU76 341 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 CLDN25C9JDP6 229 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 SLC25A14O95258 325 aaPredicted RBP12.72□□□□□ -0.37
LITAF-203ENST00000413364 CAPN1P07384 714 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 EPCAMP16422 314 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 ITGB6P18564 788 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 XRCC1P18887 633 aaPredicted RBP12.72□□□□□ -0.37
LITAF-203ENST00000413364 TGM1P22735 817 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 ME2P23368 584 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 DGKAP23743 735 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 PRDX3P30048 256 aaKnown RBP12.72□□□□□ -0.37
LITAF-203ENST00000413364 NTHL1P78549 312 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 PCBP2Q15366 365 aaKnown RBP eCLIP12.72□□□□□ -0.372e-14■□□□□ 8.6
LITAF-203ENST00000413364 PRSS36Q5K4E3 855 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 LY6G5CQ5SRR4 150 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 GPRC6AQ5T6X5 926 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 HACD2Q6Y1H2 254 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 LINC00299Q6ZSB3 139 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 ADIPOR2Q86V24 386 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 PLPP6Q8IY26 295 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 HERVK_113Q902F9 699 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 SGCDQ92629 289 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 ZUFSPQ96AP4 578 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 CPNE5Q9HCH3 593 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 GIMAP2Q9UG22 337 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 ZNF225Q9UK10 706 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 CDC14AQ9UNH5 594 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 RWDD3Q9Y3V2 267 aa12.72□□□□□ -0.37
LITAF-203ENST00000413364 TNPO3Q9Y5L0 923 aaKnown RBP12.72□□□□□ -0.37
LITAF-203ENST00000413364 WASH3PC4AMC7 463 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 H0YC42 278 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 MRASO14807 208 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 RAD51BO15315 384 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 ZW10O43264 779 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 NRP2O60462 931 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 TRIM16O95361 564 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 UGT2B4P06133 528 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 HGFP14210 728 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 TCF3P15923 654 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 LHCGRP22888 699 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 RRM2P31350 389 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 PSMD8P48556 350 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 TPD52P55327 224 aaPredicted RBP12.71□□□□□ -0.37
LITAF-203ENST00000413364 SEMG2Q02383 582 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 PTSQ03393 145 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 KIF19Q2TAC6 998 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 FGD3Q5JSP0 725 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 GALNT18Q6P9A2 607 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 Q6ZVU0 165 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 KIAA0907Q7Z7F0 614 aaPredicted RBP12.71□□□□□ -0.37
LITAF-203ENST00000413364 FUNDC1Q8IVP5 155 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 MIER2Q8N344 545 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 ZBTB2Q8N680 514 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 SNX31Q8N9S9 440 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 CHST14Q8NCH0 376 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 SIMC1Q8NDZ2 872 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 OR9I1Q8NGQ6 314 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 ESAMQ96AP7 390 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 SNX18Q96RF0 628 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 BRD9Q9H8M2 597 aa12.71□□□□□ -0.37
LITAF-203ENST00000413364 TEX51A0A1B0GUA7 166 aa12.71□□□□□ -0.38
LITAF-203ENST00000413364 LINC01553A4QN01 128 aa12.71□□□□□ -0.38
LITAF-203ENST00000413364 BBIP1A8MTZ0 92 aa12.71□□□□□ -0.38
LITAF-203ENST00000413364 TRIM38O00635 465 aa12.71□□□□□ -0.38
LITAF-203ENST00000413364 DYRK3O43781 588 aa12.71□□□□□ -0.38
LITAF-203ENST00000413364 JRKO75564 520 aa12.71□□□□□ -0.38
LITAF-203ENST00000413364 GSTM1P09488 218 aa12.71□□□□□ -0.38
LITAF-203ENST00000413364 PRR35P0CG20 571 aa12.71□□□□□ -0.38
LITAF-203ENST00000413364 SERPINB1P30740 379 aa12.71□□□□□ -0.38
LITAF-203ENST00000413364 IRS1P35568 1242 aa12.71□□□□□ -0.38
LITAF-203ENST00000413364 CBX5P45973 191 aa12.71□□□□□ -0.38
LITAF-203ENST00000413364 FLOT2Q14254 428 aa12.71□□□□□ -0.38
LITAF-203ENST00000413364 XKR7Q5GH72 579 aa12.71□□□□□ -0.38
LITAF-203ENST00000413364 ZDHHC20Q5W0Z9 365 aa12.71□□□□□ -0.38
LITAF-203ENST00000413364 SPATA19Q7Z5L4 167 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms