RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 A0A1W2PPV9 198 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 ARHGEF33A8MVX0 844 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 TMEM150CB9EJG8 249 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 E7ESA3 106 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 CPNE3O75131 537 aaKnown RBP16.77■□□□□ 0.28
HSPG2-204ENST00000412328 PSIP1O75475 530 aaKnown RBP16.77■□□□□ 0.28
HSPG2-204ENST00000412328 SCRG1O75711 98 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 HAUS5O94927 633 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 RPN2P04844 631 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 RPL21P46778 160 aaKnown RBP16.77■□□□□ 0.28
HSPG2-204ENST00000412328 LY6DQ14210 128 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 TBR1Q16650 682 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 SPANXN3Q5MJ09 141 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 TMTC4Q5T4D3 741 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 ATP1A1-AS1Q5TC04 95 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 FAM20CQ8IXL6 584 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 EXD3Q8N9H8 876 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 CFAP61Q8NHU2 1237 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 EXTL1Q92935 676 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 CERS2Q96G23 380 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 SNF8Q96H20 258 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 KRT12Q99456 494 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 AARSD1Q9BTE6 412 aaKnown RBP16.77■□□□□ 0.28
HSPG2-204ENST00000412328 SYTL2Q9HCH5 934 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 ENAMQ9NRM1 1142 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 WDR70Q9NW82 654 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 KLHL42Q9P2K6 505 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 ZNF462Q96JM2 2506 aa16.77■□□□□ 0.28
HSPG2-204ENST00000412328 TNRC6AQ8NDV7 1962 aaKnown RBP16.77■□□□□ 0.27
HSPG2-204ENST00000412328 GCN1Q92616 2671 aaKnown RBP16.76■□□□□ 0.27
HSPG2-204ENST00000412328 ZNF891A8MT65 544 aaPredicted RBP16.76■□□□□ 0.27
HSPG2-204ENST00000412328 MYO1CO00159 1063 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 SMAPO00193 183 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 NKX2-8O15522 239 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 TTC4O95801 387 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 MT-ND3P03897 115 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 NTRK1P04629 796 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 ERVK-10P10266 1014 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 MAGP20916 626 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 DLSTP36957 453 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 ELK3P41970 407 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 ARL4DP49703 201 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 THOC5Q13769 683 aaKnown RBP16.76■□□□□ 0.27
HSPG2-204ENST00000412328 FASTKD3Q14CZ7 662 aaKnown RBP16.76■□□□□ 0.27
HSPG2-204ENST00000412328 DEFB110Q30KQ9 67 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 BBS9Q3SYG4 887 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 LCN10Q6JVE6 187 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 TRMT10BQ6PF06 316 aaKnown RBP16.76■□□□□ 0.27
HSPG2-204ENST00000412328 NEK10Q6ZWH5 1172 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 ZNF572Q7Z3I7 529 aaPredicted RBP16.76■□□□□ 0.27
HSPG2-204ENST00000412328 GALNT7Q86SF2 657 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 SPATA4Q8NEY3 305 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 CALML6Q8TD86 181 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 KIAA1143Q96AT1 154 aaPredicted RBP16.76■□□□□ 0.27
HSPG2-204ENST00000412328 NAT9Q9BTE0 207 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 IARS2Q9NSE4 1012 aaKnown RBP16.76■□□□□ 0.27
HSPG2-204ENST00000412328 PCMTD2Q9NV79 361 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 CHMP2BQ9UQN3 213 aa16.76■□□□□ 0.27
HSPG2-204ENST00000412328 PFDN6O15212 129 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 KDM1AO60341 852 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 CAPN1P07384 714 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 FURINP09958 794 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 PSMB5P28074 263 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 PAFAH1B1P43034 410 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 MRPS25P82663 173 aaKnown RBP16.75■□□□□ 0.27
HSPG2-204ENST00000412328 C2orf54Q08AI8 447 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 DNASE1L3Q13609 305 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 CUL1Q13616 776 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 FRG1Q14331 258 aaKnown RBP16.75■□□□□ 0.27
HSPG2-204ENST00000412328 HIF1AQ16665 826 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 KLHL38Q2WGJ6 581 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 FCRL6Q6DN72 434 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 FAM199XQ6PEV8 388 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-204ENST00000412328 FAM198BQ6UWH4 519 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 TAX1BP1Q86VP1 789 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 TMEM126BQ8IUX1 230 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 DSELQ8IZU8 1212 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 ZNF843Q8N446 348 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 DNAJC22Q8N4W6 341 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 RAD51AP1Q96B01 352 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 LRRC39Q96DD0 335 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 TCTN2Q96GX1 697 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 GPR21Q99679 349 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 EFHD1Q9BUP0 239 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 RAB11FIP5Q9BXF6 653 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 GRHL1Q9NZI5 618 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 SPATA7Q9P0W8 599 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 TSR3Q9UJK0 312 aaKnown RBP16.75■□□□□ 0.27
HSPG2-204ENST00000412328 DHRS7Q9Y394 339 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 KLK4Q9Y5K2 254 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 COMMD10Q9Y6G5 202 aa16.75■□□□□ 0.27
HSPG2-204ENST00000412328 EFCAB8A8MWE9 144 aa16.74■□□□□ 0.27
HSPG2-204ENST00000412328 C21orf140B9A014 251 aa16.74■□□□□ 0.27
HSPG2-204ENST00000412328 RAD51CO43502 376 aa16.74■□□□□ 0.27
HSPG2-204ENST00000412328 NRP2O60462 931 aa16.74■□□□□ 0.27
HSPG2-204ENST00000412328 CHRM3P20309 590 aa16.74■□□□□ 0.27
HSPG2-204ENST00000412328 CCNFP41002 786 aa16.74■□□□□ 0.27
HSPG2-204ENST00000412328 YBX1P67809 324 aaKnown RBP16.74■□□□□ 0.27
HSPG2-204ENST00000412328 FASTKQ14296 549 aaKnown RBP16.74■□□□□ 0.27
HSPG2-204ENST00000412328 CYP2A13Q16696 494 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms