RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 FGFBP3Q8TAT2 258 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 IRGQQ8WZA9 623 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 STAMBPL1Q96FJ0 436 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 C17orf77Q96MU5 243 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 CCDC43Q96MW1 224 aaKnown RBP3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 RAD9AQ99638 391 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 LRRC1Q9BTT6 524 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZNF350Q9GZX5 532 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 RETREG1Q9H6L5 497 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 Q9H8V8 135 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 DBNDD1Q9H9R9 158 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 APOBEC3GQ9HC16 384 aaKnown RBP3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 DNAJC17Q9NVM6 304 aaKnown RBP3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 SEPT10Q9P0V9 454 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 CACNG4Q9UBN1 327 aa3.81□□□□□ -1.8
RNU2-28P-201ENST00000410457 RPGRIP1LQ68CZ1 1315 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 TRAV24A0A0B4J272 114 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 SDR42E2A6NKP2 422 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 PLOD2O00469 737 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 SELENOFO60613 162 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 ATP6AP2O75787 350 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 BAG4O95429 457 aaKnown RBP3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 HSPA8P11142 646 aaKnown RBP3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 IRF2P14316 349 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 FRKP42685 505 aaPredicted RBP3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 FUT6P51993 359 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 MTCP1P56278 107 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 DSCR9P59020 149 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 LINC00205P59089 165 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 PITX1P78337 314 aaPredicted RBP3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 COASYQ13057 564 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 PPP2R5CQ13362 524 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 VEZF1Q14119 521 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 PTGISQ16647 500 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 KIF19Q2TAC6 998 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 KBTBD12Q3ZCT8 623 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 FUT11Q495W5 492 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 LBHQ53QV2 105 aaPredicted RBP3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 UNQ6126/PRO20091Q6UXV3 157 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 NRARPQ7Z6K4 114 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 SIAH3Q8IW03 269 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 RASGEF1AQ8N9B8 481 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 NAT8LQ8N9F0 302 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 DBF4BQ8NFT6 615 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 PROX1Q92786 737 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 NEUROG1Q92886 237 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 RIT1Q92963 219 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 EXOC4Q96A65 974 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZNF479Q96JC4 524 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 MINDY3Q9H8M7 445 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 CD93Q9NPY3 652 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 GSN-AS1Q9NRJ2 163 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 CNIH4Q9P003 139 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 RNF7Q9UBF6 113 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 MALT1Q9UDY8 824 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 KNSTRNQ9Y448 316 aa3.8□□□□□ -1.8
RNU2-28P-201ENST00000410457 A0A1W2PN81 502 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 A0A1W2PPW3 197 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 A0A1W2PS18 150 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 CASTOR2A6NHX0 329 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 CTSVO60911 334 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 RTN2O75298 545 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 BMP15O95972 392 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 IGHV4-39P01824 125 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 IGKV2-30P06310 120 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 NGFRP08138 427 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 CHRNA7P36544 502 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 MNDAP41218 407 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 CASP3P42574 277 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 CDX1P47902 265 aaPredicted RBP3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 NR2C2P49116 596 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 HOXA1P49639 335 aaPredicted RBP3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 KHKP50053 298 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 PDLIM4P50479 330 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 ST8SIA6P61647 398 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 MBTD1Q05BQ5 628 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 RCN2Q14257 317 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 SLC39A14Q15043 492 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 TAZQ16635 292 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 UGT3A2Q3SY77 523 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 LACTB2Q53H82 288 aaPredicted RBP3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 STXBP5Q5T5C0 1151 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 CYP4A22Q5TCH4 519 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 CASC4Q6P4E1 433 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 NHLRC1Q6VVB1 395 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 TUBA1AQ71U36 451 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 CLYBLQ8N0X4 340 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 UXS1Q8NBZ7 420 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 P2RX5Q93086 422 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 VOPP1Q96AW1 172 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 CENPTQ96BT3 561 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 SNRNP40Q96DI7 357 aaKnown RBP3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 CABS1Q96KC9 395 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 TUBA1CQ9BQE3 449 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 POLR3CQ9BUI4 534 aaPredicted RBP3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 SLC2A11Q9BYW1 496 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 PANK2Q9BZ23 570 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 PRRG4Q9BZD6 226 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 MIS12Q9H081 205 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 SLC38A7Q9NVC3 462 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms