RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 LILRB4Q8NHJ6 448 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ZNF583Q96ND8 569 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 TMEM246Q9BRR3 403 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ZNF577Q9BSK1 485 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 C16orf70Q9BSU1 422 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 CLPBQ9H078 707 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 ZFP14Q9HCL3 533 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 TSR3Q9UJK0 312 aaKnown RBP3.05□□□□□ -1.92
RGPD3-202ENST00000409886 NOTCH1P46531 2555 aa3.05□□□□□ -1.92
RGPD3-202ENST00000409886 HUWE1Q7Z6Z7 4374 aaKnown RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 CLDN5O00501 218 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 ANKRD28O15084 1053 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 KCNN4O15554 427 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 AKAP8O43823 692 aaKnown RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 CBFA2T3O75081 653 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 LRG1P02750 347 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 C8BP07358 591 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 FAM58BPP0C7Q3 252 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 CXCL8P10145 99 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 DESP17661 470 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 CRHR1P34998 444 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 GRIA4P48058 902 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 SLC26A2P50443 739 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 VLDLRP98155 873 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 CARD16Q5EG05 197 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 BRMS1LQ5PSV4 323 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 PPP1R26Q5T8A7 1209 aaPredicted RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 GLYATQ6IB77 296 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 PPP1R21Q6ZMI0 780 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 STXBP4Q6ZWJ1 553 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 SLC24A5Q71RS6 500 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 BNIPLQ7Z465 357 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 LIMS2Q7Z4I7 341 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 VTCN1Q7Z7D3 282 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 B3GNT8Q7Z7M8 397 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 RNF168Q8IYW5 571 aaPredicted RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 APPL2Q8NEU8 664 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 DCAF4Q8WV16 495 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 TMEM40Q8WWA1 233 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 FBXW5Q969U6 566 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 WDR13Q9H1Z4 485 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 KCNN2Q9H2S1 579 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 GSTO2Q9H4Y5 243 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 BRD9Q9H8M2 597 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 AGO3Q9H9G7 860 aaKnown RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 RAVER2Q9HCJ3 691 aaKnown RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 TCF7L2Q9NQB0 619 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 THAP1Q9NVV9 213 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 TMEM181Q9P2C4 612 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 PCDHGA9Q9Y5G4 932 aaKnown RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 A0A096LPK6 155 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 FAM92AA1XBS5 289 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 IQCF5A8MTL0 148 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 A8MXQ7 604 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 COPEO14579 308 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 PLD2O14939 933 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 DFNA5O60443 496 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 CDK14O94921 469 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 HRGP04196 525 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 ITGB2P05107 769 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 HBQ1P09105 142 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 MAPTP10636 758 aaKnown RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 RALBP11234 206 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 SPINK2P20155 84 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 FEN1P39748 380 aaKnown RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 CDH6P55285 790 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 COPZ1P61923 177 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 SOX4Q06945 474 aaPredicted RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 CAPSQ13938 189 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 CYLC2Q14093 348 aaPredicted RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 KIAA0040Q15053 153 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 SLC10A6Q3KNW5 377 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 ZBED5Q49AG3 693 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 TMEM255AQ5JRV8 349 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 NCBP2-AS2Q69YL0 99 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 DLEU7Q6UYE1 221 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 ZBTB49Q6ZSB9 765 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 MIER3Q7Z3K6 550 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 CYP2U1Q7Z449 544 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 ZC3HC1Q86WB0 502 aaKnown RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 MEX3DQ86XN8 651 aaKnown RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 RAB3IL1Q8TBN0 382 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 PROX1Q92786 737 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 GCDHQ92947 438 aaPredicted RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 FOXJ1Q92949 421 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 GAD1Q99259 594 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 CENPKQ9BS16 269 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 TTPALQ9BTX7 342 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 ADNPQ9H2P0 1102 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 POLMQ9NP87 494 aaPredicted RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 ERVK-18Q9QC07 812 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 OPTCQ9UBM4 332 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 PCDHGA1Q9Y5H4 931 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 HNRNPDLO14979 420 aaKnown RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 MUSKO15146 869 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 SUV39H1O43463 412 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 IL1BP01584 269 aa3.04□□□□□ -1.92
RGPD3-202ENST00000409886 KRT18P05783 430 aaKnown RBP3.04□□□□□ -1.92
RGPD3-202ENST00000409886 ADH1AP07327 375 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms