RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 SYTL2Q9HCH5 934 aa13.54□□□□□ -0.24
GYPC-203ENST00000409836 OCIAD1Q9NX40 245 aa13.54□□□□□ -0.24
GYPC-203ENST00000409836 NINJ2Q9NZG7 142 aa13.54□□□□□ -0.24
GYPC-203ENST00000409836 ZMIZ1Q9ULJ6 1067 aa13.54□□□□□ -0.24
GYPC-203ENST00000409836 TMEM184BQ9Y519 407 aaPredicted RBP13.54□□□□□ -0.24
GYPC-203ENST00000409836 FER1L5A0AVI2 2057 aa13.54□□□□□ -0.24
GYPC-203ENST00000409836 A0A1W2PPV9 198 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 EFCAB7A8K855 629 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 PRAMEF10O60809 474 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 RASSF9O75901 435 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 ABHD2P08910 425 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 SPTBP11277 2137 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 MCM3P25205 808 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 EIF2S3P41091 472 aaKnown RBP13.53□□□□□ -0.24
GYPC-203ENST00000409836 ABCG1P45844 678 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 ABRQ12979 859 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 MAP7Q14244 749 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 CCSMST1Q4G0I0 132 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 TMEM164Q5U3C3 297 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 TTC23LQ6PF05 361 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 CEACAM20Q6UY09 585 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 PIWIL4Q7Z3Z4 852 aaKnown RBP13.53□□□□□ -0.24
GYPC-203ENST00000409836 RAB42Q8N4Z0 105 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 GPATCH11Q8N954 259 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 OR9A1PQ8NGU1 263 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 FBF1Q8TES7 1133 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.53□□□□□ -0.245e-8■■■■■ 65.3
GYPC-203ENST00000409836 DLG3Q92796 817 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 PMEPA1Q969W9 287 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 SLC12A9Q9BXP2 914 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 TXLNGYQ9BZA5 131 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 XKR8Q9H6D3 395 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 SPHK1Q9NYA1 384 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 FOXJ2Q9P0K8 574 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 KLHL3Q9UH77 587 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 PCDHB11Q9Y5F2 797 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 SEC16AO15027 2179 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 ITPR1Q14643 2758 aa13.53□□□□□ -0.24
GYPC-203ENST00000409836 CACNA1GO43497 2377 aa13.52□□□□□ -0.24
GYPC-203ENST00000409836 A0A0J9YY10 115 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 GSAPA4D1B5 854 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 DLGAP3O95886 979 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 ENO2P09104 434 aaPredicted RBP13.52□□□□□ -0.25
GYPC-203ENST00000409836 ST6GAL1P15907 406 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 PHBP35232 272 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 GABRA4P48169 554 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 TAS2R39P59534 338 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 IL2P60568 153 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 TUBB4BP68371 445 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 ACY1Q03154 408 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 PDAP1Q13442 181 aaKnown RBP13.52□□□□□ -0.25
GYPC-203ENST00000409836 SLMAPQ14BN4 828 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 PPP1R3AQ16821 1122 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.52□□□□□ -0.25
GYPC-203ENST00000409836 SNAP47Q5SQN1 464 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 DCAF12Q5T6F0 453 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 TMEM207Q6UWW9 146 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 CAPN12Q6ZSI9 719 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 CCDC91Q7Z6B0 441 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 FAM129CQ86XR2 697 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 LRRC56Q8IYG6 542 aaPredicted RBP13.52□□□□□ -0.25
GYPC-203ENST00000409836 LMNTD1Q8N9Z9 388 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 CFAP61Q8NHU2 1237 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 EEF1AKMT1Q8WVE0 214 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 SKA2Q8WVK7 121 aaPredicted RBP13.52□□□□□ -0.25
GYPC-203ENST00000409836 USP7Q93009 1102 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 LINGO1Q96FE5 620 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 TRAPPC9Q96Q05 1148 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 CYTH2Q99418 400 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 DPH1Q9BZG8 443 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 PLAGL1Q9UM63 463 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 NOVA2Q9UNW9 492 aaKnown RBP13.52□□□□□ -0.25
GYPC-203ENST00000409836 TDRKHQ9Y2W6 561 aaKnown RBP13.52□□□□□ -0.25
GYPC-203ENST00000409836 B3GALT1Q9Y5Z6 326 aa13.52□□□□□ -0.25
GYPC-203ENST00000409836 MDC1Q14676 2089 aaKnown RBP13.51□□□□□ -0.25
GYPC-203ENST00000409836 SRRM3A6NNA2 597 aaPredicted RBP13.51□□□□□ -0.25
GYPC-203ENST00000409836 ZNF839A8K0R7 811 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 A8MU76 341 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 H3BMH7 237 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 SLC16A8O95907 504 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 LIPCP11150 499 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 AP1S2P56377 157 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 NAA25Q14CX7 972 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 ST3GAL2Q16842 350 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 GRTP1Q5TC63 336 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 SBSNQ6UWP8 590 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 CEP97Q8IW35 865 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 CNPY4Q8N129 248 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 MYO1HQ8N1T3 1032 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 NKAPQ8N5F7 415 aaKnown RBP13.51□□□□□ -0.25
GYPC-203ENST00000409836 C19orf47Q8N9M1 422 aaKnown RBP13.51□□□□□ -0.25
GYPC-203ENST00000409836 OR2A1Q8NGT9 310 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 ZNF480Q8WV37 535 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 ISL2Q96A47 359 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 ZNF501Q96CX3 271 aaPredicted RBP13.51□□□□□ -0.25
GYPC-203ENST00000409836 TSPAN17Q96FV3 270 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 ELMO2Q96JJ3 720 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 PPM1MQ96MI6 270 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 IL17FQ96PD4 163 aa13.51□□□□□ -0.25
GYPC-203ENST00000409836 PARVBQ9HBI1 364 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms