RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 FAM149AA5PLN7 773 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 TM9SF1O15321 606 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 ZWINTO95229 277 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 TAC1P20366 129 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 HSD17B2P37059 387 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 BDKRB1P46663 353 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 TGFBIQ15582 683 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 PPP1R3AQ16821 1122 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 CDKL4Q5MAI5 379 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 HES3Q5TGS1 186 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 DUS1LQ6P1R4 473 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 ARL14Q8N4G2 192 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 KYQ8NBH2 561 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 TCP10LQ8TDR4 215 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 ATL1Q8WXF7 558 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 GATA6Q92908 595 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 CCDC138Q96M89 665 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 ATOH8Q96SQ7 321 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 HGH1Q9BTY7 390 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 TMEM121BQ9BXQ6 578 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 UCK1Q9HA47 277 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 ARL15Q9NXU5 204 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 XPR1Q9UBH6 696 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 IKZF3Q9UKT9 509 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 TDRKHQ9Y2W6 561 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 PLLPQ9Y342 182 aa16.04■□□□□ 0.16
TSPAN4-208ENST00000409531 ZNF839A8K0R7 811 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 MYO1CO00159 1063 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 ZW10O43264 779 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 NUDT21O43809 227 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 ANXA5P08758 320 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 TPBGLP0DKB5 382 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 CREB1P16220 341 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 GLB1P16278 677 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 SLC18A1P54219 525 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 MAZP56270 477 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 PRKG2Q13237 762 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 COL9A2Q14055 689 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 PHKG1Q16816 387 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 CDHR3Q6ZTQ4 885 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 TCAIMQ8N3R3 496 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 CCDC63Q8NA47 563 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 OR9A1PQ8NGU1 263 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 RDH11Q8TC12 318 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 DLG3Q92796 817 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 EGFL8Q99944 293 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 UTP6Q9NYH9 597 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 NUDT4Q9NZJ9 180 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 CD274Q9NZQ7 290 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 SPATA7Q9P0W8 599 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 LNPEPQ9UIQ6 1025 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 CLCA2Q9UQC9 943 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 PTPRBP23467 1997 aa16.03■□□□□ 0.16
TSPAN4-208ENST00000409531 RHPN2P1A8MT19 583 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 C1QTNF9BB2RNN3 333 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 SUPT3HB4E1H0 165 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 TK2O00142 265 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 PLIN3O60664 434 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 SMIM24O75264 130 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 SUPT3HO75486 399 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 MT-CO3P00414 261 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 PROCP04070 461 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 C1QTNF9P0C862 333 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 HNMTP50135 292 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 CLDN6P56747 220 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 TARDBPQ13148 414 aaKnown RBP eCLIP16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 ARHGAP19Q14CB8 494 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 PLCL1Q15111 1095 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 PERM1Q5SV97 790 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 C16orf46Q6P387 395 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 UNQ6494/PRO21346Q6UXR6 183 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 TMEM26Q6ZUK4 368 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 MARCH9Q86YJ5 346 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 PDPRQ8NCN5 879 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 EXT2Q93063 718 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 NKIRAS1Q9NYS0 192 aa16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 CPSF2Q9P2I0 782 aaKnown RBP16.02■□□□□ 0.16
TSPAN4-208ENST00000409531 TMEM120BA0PK00 339 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 TRABD2BA6NFA1 517 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 LILRA5A6NI73 299 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 UBXN8O00124 270 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 GUCA1CO95843 209 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 GFAPP14136 432 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 PNLIPP16233 465 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 HPDP32754 393 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 SHMT2P34897 504 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 RPA3P35244 121 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 GPR3P46089 330 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 KCNC1P48547 511 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 RAB28P51157 221 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 CAMK2BQ13554 666 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 GPR18Q14330 331 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 CDCP2Q5VXM1 449 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 ANKS6Q68DC2 871 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 SULT1C3Q6IMI6 304 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 SFTPA2Q8IWL1 248 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 DCBLD1Q8N8Z6 715 aa16.01■□□□□ 0.15
TSPAN4-208ENST00000409531 OR52E1Q8NGJ3 308 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms