RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 H1F0P07305 194 aaKnown RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ZNF20P17024 532 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ITPKBP27987 946 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 CSTF2P33240 577 aaKnown RBP eCLIP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 CCR8P51685 355 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 XKP51811 444 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 LSM3P62310 102 aaKnown RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ADAM17P78536 824 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 KCNC4Q03721 635 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ATG9BQ674R7 924 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 UNC5DQ6UXZ4 953 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 RD3Q7Z3Z2 195 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ALDH16A1Q8IZ83 802 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 TNS4Q8IZW8 715 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 LIX1Q8N485 282 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 XAGE5Q8WWM1 108 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 OSTF1Q92882 214 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 PPM1MQ96MI6 270 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 CCDC32Q9BV29 185 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 SLC32A1Q9H598 525 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 TESMINQ9Y4I5 508 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 RCCD1A6NED2 376 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 TMEM150CB9EJG8 249 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 OR1I1O60431 355 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 NOL4O94818 638 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 IFNA1P01562 189 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 TFPIP10646 304 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 GLP1RP43220 463 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 DAOAP59103 153 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 DSTNP60981 165 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 S100A12P80511 92 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 EMX2Q04743 252 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 FUT2Q10981 343 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 EMC10Q5UCC4 262 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ANKRD26P1Q6NSI1 321 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 LRRC69Q6ZNQ3 347 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 BTN2A1Q7KYR7 527 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ARHGAP12Q8IWW6 846 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 CMASQ8NFW8 434 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 BBS10Q8TAM1 723 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 CYP2W1Q8TAV3 490 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 SNX27Q96L92 541 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 KLHL5Q96PQ7 755 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 DERL2Q9GZP9 239 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 RHBGQ9H310 441 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ACTL8Q9H568 366 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 NOCTQ9UK39 431 aaKnown RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 A0A1W2PQ45 241 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 A0A1W2PQY0 241 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 A0A1W2PRQ8 180 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 MOXD2PA6NHM9 499 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 SOBPA7XYQ1 873 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 SCAMP3O14828 347 aaKnown RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 LINGO3P0C6S8 592 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 CD36P16671 472 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 BMP6P22004 513 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 IL12BP29460 328 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 MAP3K8P41279 467 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 CDH12P55289 794 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 FADDQ13158 208 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 SNTA1Q13424 505 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 SCARB2Q14108 478 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 SIM2Q14190 667 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ZNF404Q494X3 552 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 PRAMEF17Q5VTA0 474 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 MSANTD2Q6P1R3 559 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 FAM151BQ6UXP7 276 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 GDPGP1Q6ZNW5 385 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 DCDC5Q6ZRR9 648 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 CYP4X1Q8N118 509 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 OR5B17Q8NGF7 314 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 C12orf42Q96LP6 360 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 CGREF1Q99674 301 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 UCK2Q9BZX2 261 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 ADAMTS10Q9H324 1103 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 MARCH7Q9H992 704 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 CRTAC1Q9NQ79 661 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 POLR3BQ9NW08 1133 aaPredicted RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 TAS2R8Q9NYW2 309 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 GRHL1Q9NZI5 618 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 C14orf166Q9Y224 244 aaKnown RBP5.98□□□□□ -1.45
SCN1A-203ENST00000409050 SLC45A1Q9Y2W3 748 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 PREX1Q8TCU6 1659 aa5.98□□□□□ -1.45
SCN1A-203ENST00000409050 SMIM28A0A1B0GU29 152 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 A0A1W2PRB8 838 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 BHMG1C9JSJ3 638 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 EIF1AYO14602 144 aaKnown RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 HSPA12AO43301 675 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 HCN1O60741 890 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 KCNJ13O60928 360 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 RBMXL2O75526 392 aaKnown RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 PRH1P02810 166 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ERCC1P07992 297 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 SELPP16109 830 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 NT5EP21589 574 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 AKT2P31751 481 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 EIF1AXP47813 144 aaKnown RBP5.97□□□□□ -1.45
SCN1A-203ENST00000409050 NAE1Q13564 534 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 C9orf131Q5VYM1 1079 aa5.97□□□□□ -1.45
SCN1A-203ENST00000409050 ANKRD22Q5VYY1 191 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms