RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 PDX1P52945 283 aa28.41■■■□□ 2.14
USP42-202ENST00000404008 CLDN6P56747 220 aa28.41■■■□□ 2.14
USP42-202ENST00000404008 PPP1CAP62136 330 aa28.41■■■□□ 2.14
USP42-202ENST00000404008 HES3Q5TGS1 186 aa28.41■■■□□ 2.14
USP42-202ENST00000404008 TMEM71Q6P5X7 295 aa28.41■■■□□ 2.14
USP42-202ENST00000404008 MBOAT1Q6ZNC8 495 aa28.41■■■□□ 2.14
USP42-202ENST00000404008 ISCA2Q86U28 154 aa28.41■■■□□ 2.14
USP42-202ENST00000404008 PLXDC1Q8IUK5 500 aa28.41■■■□□ 2.14
USP42-202ENST00000404008 LMNTD1Q8N9Z9 388 aa28.41■■■□□ 2.14
USP42-202ENST00000404008 OR4D9Q8NGE8 314 aa28.41■■■□□ 2.14
USP42-202ENST00000404008 HMGCLL1Q8TB92 370 aa28.41■■■□□ 2.14
USP42-202ENST00000404008 ARL15Q9NXU5 204 aa28.41■■■□□ 2.14
USP42-202ENST00000404008 UTP6Q9NYH9 597 aaKnown RBP28.41■■■□□ 2.14
USP42-202ENST00000404008 PABPN1LA6NDY0 278 aaKnown RBP28.4■■■□□ 2.14
USP42-202ENST00000404008 MATN2O00339 956 aa28.4■■■□□ 2.14
USP42-202ENST00000404008 CAPN5O15484 640 aaPredicted RBP28.4■■■□□ 2.14
USP42-202ENST00000404008 C9P02748 559 aa28.4■■■□□ 2.14
USP42-202ENST00000404008 HSD17B2P37059 387 aa28.4■■■□□ 2.14
USP42-202ENST00000404008 PNLIPRP1P54315 467 aa28.4■■■□□ 2.14
USP42-202ENST00000404008 GFERP55789 205 aa28.4■■■□□ 2.14
USP42-202ENST00000404008 PRKAA1Q13131 559 aa28.4■■■□□ 2.14
USP42-202ENST00000404008 CASP8Q14790 479 aa28.4■■■□□ 2.14
USP42-202ENST00000404008 ACAP2Q15057 778 aa28.4■■■□□ 2.14
USP42-202ENST00000404008 KRT71Q3SY84 523 aa28.4■■■□□ 2.14
USP42-202ENST00000404008 ARMC6Q6NXE6 501 aa28.4■■■□□ 2.14
USP42-202ENST00000404008 FRA10AC1Q70Z53 315 aa28.4■■■□□ 2.14
USP42-202ENST00000404008 RAB44Q7Z6P3 723 aaPredicted RBP28.4■■■□□ 2.14
USP42-202ENST00000404008 ZNF480Q8WV37 535 aa28.4■■■□□ 2.14
USP42-202ENST00000404008 ALG9Q9H6U8 611 aa28.4■■■□□ 2.14
USP42-202ENST00000404008 GOLGA8RI6L899 631 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 TOP3BO95985 862 aaKnown RBP28.39■■■□□ 2.14
USP42-202ENST00000404008 MT-CO3P00414 261 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 PYGBP11216 843 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 IMPA1P29218 277 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 GLRBP48167 497 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 IRGCQ6NXR0 463 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 KLC3Q6P597 504 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 SH2D5Q6ZV89 423 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 SLITRK4Q8IW52 837 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 C2orf73Q8N5S3 287 aaPredicted RBP28.39■■■□□ 2.14
USP42-202ENST00000404008 STAG3L4Q8TBR4 150 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 ZDHHC12Q96GR4 267 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 TGM7Q96PF1 710 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 SEMA6CQ9H3T2 930 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 ZNF358Q9NW07 568 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 SPHK1Q9NYA1 384 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 STOX2Q9P2F5 926 aaPredicted RBP28.39■■■□□ 2.14
USP42-202ENST00000404008 PDP2Q9P2J9 529 aa28.39■■■□□ 2.14
USP42-202ENST00000404008 IGHV5-10-1A0A0J9YXX1 117 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 CCDC189A1A4V9 331 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 PIPSLA2A3N6 862 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 GSAPA4D1B5 854 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 C2orf74A8MZ97 194 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 PEBP1P30086 187 aaKnown RBP28.38■■■□□ 2.13
USP42-202ENST00000404008 CDKL1Q00532 357 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 FASTKQ14296 549 aaKnown RBP28.38■■■□□ 2.13
USP42-202ENST00000404008 TGFBIQ15582 683 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 TSNAXIP1Q2TAA8 658 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 CEP85LQ5SZL2 805 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 N4BP2L1Q5TBK1 243 aaPredicted RBP28.38■■■□□ 2.13
USP42-202ENST00000404008 DGLUCYQ7Z3D6 616 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 GPSM1Q86YR5 675 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 RHEBL1Q8TAI7 183 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 ACTR10Q9NZ32 417 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 POMT2Q9UKY4 750 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 RNF112Q9ULX5 631 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 CLCA2Q9UQC9 943 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 ENTPD2Q9Y5L3 495 aa28.38■■■□□ 2.13
USP42-202ENST00000404008 UQCRHLA0A096LP55 91 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 ZNF839A8K0R7 811 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 KERAO60938 352 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 GUCA1CO95843 209 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 UQCRHP07919 91 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 MPSTP25325 297 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 KCNC1P48547 511 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 ZFP36L1Q07352 338 aaKnown RBP28.37■■■□□ 2.13
USP42-202ENST00000404008 KIR2DS3Q14952 304 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 B3GNT8Q7Z7M8 397 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 TAX1BP1Q86VP1 789 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 LCA5Q86VQ0 697 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 TMPRSS12Q86WS5 348 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 DCBLD1Q8N8Z6 715 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 FLVCR1-AS1Q8TAF5 88 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 TSNARE1Q96NA8 513 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 DEPDC7Q96QD5 511 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 ATOH8Q96SQ7 321 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 E7ENX8 843 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 THRAP10827 490 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 KPNA2P52292 529 aaKnown RBP28.37■■■□□ 2.13
USP42-202ENST00000404008 TAP2Q03519 686 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 AGTRAPQ6RW13 159 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 FAM92BQ6ZTR7 304 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 TRABD2AQ86V40 505 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 LRRC56Q8IYG6 542 aaPredicted RBP28.37■■■□□ 2.13
USP42-202ENST00000404008 SYTL1Q8IYJ3 562 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 CACTIN-AS1Q8N1I8 211 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 PPFIBP2Q8ND30 876 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 FBXL8Q96CD0 374 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 TMEM74Q96NL1 305 aa28.37■■■□□ 2.13
USP42-202ENST00000404008 CD180Q99467 661 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms