RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PABPN1LA6NDY0 278 aaKnown RBP17.09■□□□□ 0.33
CTNS-203ENST00000399306 PLD2O14939 933 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 PRICKLE3O43900 615 aaPredicted RBP17.09■□□□□ 0.33
CTNS-203ENST00000399306 ZBTB11O95625 1053 aaPredicted RBP17.09■□□□□ 0.33
CTNS-203ENST00000399306 SNRPAP09012 282 aaKnown RBP17.09■□□□□ 0.33
CTNS-203ENST00000399306 NUDT17P0C025 328 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 MSL3P1P0C860 447 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 SLC35E2BP0CK96 405 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 MAGEA12P43365 314 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 KPNA2P52292 529 aaKnown RBP17.09■□□□□ 0.33
CTNS-203ENST00000399306 C16orf72Q14CZ0 275 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 UAP1Q16222 522 aaPredicted RBP17.09■□□□□ 0.33
CTNS-203ENST00000399306 CACHD1Q5VU97 1274 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 SPESP1Q6UW49 350 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 TIFABQ6ZNK6 161 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 LINC01555Q8NAE3 123 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 ATL1Q8WXF7 558 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 JPH3Q8WXH2 748 aaPredicted RBP17.09■□□□□ 0.33
CTNS-203ENST00000399306 SMPDL3AQ92484 453 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 OR2A14Q96R47 310 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 PKP4Q99569 1192 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 XKR8Q9H6D3 395 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 CAB39LQ9H9S4 337 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.09■□□□□ 0.33
CTNS-203ENST00000399306 TLK1Q9UKI8 766 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 PDE10AQ9Y233 779 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 BTRCQ9Y297 605 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 ACOT9Q9Y305 439 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 KLK4Q9Y5K2 254 aa17.09■□□□□ 0.33
CTNS-203ENST00000399306 V9GYY5 206 aaPredicted RBP17.09■□□□□ 0.33
CTNS-203ENST00000399306 GSAPA4D1B5 854 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 POC1B-GALNT4F8VUJ3 575 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 CCDC166P0CW27 439 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 COL6A2P12110 1019 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 NELFEP18615 380 aaKnown RBP17.08■□□□□ 0.32
CTNS-203ENST00000399306 CCND1P24385 295 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 GCAP28676 217 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 OAS2P29728 719 aaKnown RBP17.08■□□□□ 0.32
CTNS-203ENST00000399306 PNLIPRP1P54315 467 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 RAB15P59190 212 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 ZNF460Q14592 562 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 PPP1R3AQ16821 1122 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 CCSMST1Q4G0I0 132 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 TAF1BQ53T94 588 aaPredicted RBP17.08■□□□□ 0.32
CTNS-203ENST00000399306 SBSNQ6UWP8 590 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 TBC1D1Q86TI0 1168 aaPredicted RBP17.08■□□□□ 0.32
CTNS-203ENST00000399306 LCA5Q86VQ0 697 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 BPHLQ86WA6 291 aaPredicted RBP17.08■□□□□ 0.32
CTNS-203ENST00000399306 FBXO39Q8N4B4 442 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 FLVCR1-AS1Q8TAF5 88 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 ANKRD49Q8WVL7 239 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 UBLCP1Q8WVY7 318 aaPredicted RBP17.08■□□□□ 0.32
CTNS-203ENST00000399306 DLG3Q92796 817 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 PRR11Q96HE9 360 aaPredicted RBP17.08■□□□□ 0.32
CTNS-203ENST00000399306 CABS1Q96KC9 395 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 MAP3K3Q99759 626 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 NMRAL1Q9HBL8 299 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 FBXO8Q9NRD0 319 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 SNX15Q9NRS6 342 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 PSMC3IPQ9P2W1 217 aaPredicted RBP17.08■□□□□ 0.32
CTNS-203ENST00000399306 CTNNAL1Q9UBT7 734 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 ADAMTS6Q9UKP5 1117 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 PLAGL1Q9UM63 463 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 LOXL2Q9Y4K0 774 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 OARD1Q9Y530 152 aa17.08■□□□□ 0.32
CTNS-203ENST00000399306 SNRNP200O75643 2136 aaKnown RBP17.08■□□□□ 0.32
CTNS-203ENST00000399306 A0A0J9YY10 115 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 IQANK1A0A1B0GTG1 560 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 TRABD2BA6NFA1 517 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 PHGDHO43175 533 aaKnown RBP17.07■□□□□ 0.32
CTNS-203ENST00000399306 RASSF9O75901 435 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 SLC16A8O95907 504 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 ALDOAP04075 364 aaKnown RBP17.07■□□□□ 0.32
CTNS-203ENST00000399306 MPOP05164 745 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 C2P06681 752 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 LTA4HP09960 611 aaKnown RBP17.07■□□□□ 0.32
CTNS-203ENST00000399306 CD1DP15813 335 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 UGT2B7P16662 529 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 TYK2P29597 1187 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 HSD17B3P37058 310 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 HNMTP50135 292 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 HSD11B2P80365 405 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 FAM92BQ6ZTR7 304 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 RAPH1Q70E73 1250 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 D2HGDHQ8N465 521 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 LMNTD1Q8N9Z9 388 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 UHMK1Q8TAS1 419 aaKnown RBP17.07■□□□□ 0.32
CTNS-203ENST00000399306 ZNF480Q8WV37 535 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 GATA6Q92908 595 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 KIAA1191Q96A73 305 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 IL17FQ96PD4 163 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 ZPBPQ9BS86 351 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 PCBD2Q9H0N5 130 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 INTS7Q9NVH2 962 aaKnown RBP17.07■□□□□ 0.32
CTNS-203ENST00000399306 SIDT1Q9NXL6 827 aaKnown RBP17.07■□□□□ 0.32
CTNS-203ENST00000399306 TSR3Q9UJK0 312 aaKnown RBP17.07■□□□□ 0.32
CTNS-203ENST00000399306 SATB2Q9UPW6 733 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 PCDHGA7Q9Y5G6 932 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 PCDHGA3Q9Y5H0 932 aa17.07■□□□□ 0.32
CTNS-203ENST00000399306 IGHV5-51A0A0C4DH38 117 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms