RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 AP1M2Q9Y6Q5 423 aa12.94□□□□□ -0.34
VCX3A-202ENST00000398729 CRYBG3Q68DQ2 2970 aa12.94□□□□□ -0.34
VCX3A-202ENST00000398729 GOLGA8KD6RF30 607 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 H3BMM5 538 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 GOLGA8TH3BQL2 631 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 ZSCAN12O43309 604 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 ZNF749O43361 778 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 AVILO75366 819 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 RFPL1O75677 317 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 OR2B3O76000 313 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 OGNP20774 298 aaKnown RBP12.93□□□□□ -0.34
VCX3A-202ENST00000398729 AGXTP21549 392 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 CD9P21926 228 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 PEBP1P30086 187 aaKnown RBP12.93□□□□□ -0.34
VCX3A-202ENST00000398729 COILP38432 576 aaPredicted RBP12.93□□□□□ -0.34
VCX3A-202ENST00000398729 ZIC1Q15915 447 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 TYSND1Q2T9J0 566 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 DEFB110Q30KQ9 67 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 LACTB2Q53H82 288 aaPredicted RBP12.93□□□□□ -0.34
VCX3A-202ENST00000398729 KIAA0930Q6ICG6 404 aaPredicted RBP12.93□□□□□ -0.34
VCX3A-202ENST00000398729 ENDOVQ8N8Q3 282 aaKnown RBP12.93□□□□□ -0.34
VCX3A-202ENST00000398729 MENTQ9BUN1 341 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 RAB11FIP5Q9BXF6 653 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 SNX7Q9UNH6 387 aa12.93□□□□□ -0.34
VCX3A-202ENST00000398729 SPTBP11277 2137 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 GOLGA6L10A0A0M3HER8 536 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 MAGEB16A2A368 324 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 SDR42E2A6NKP2 422 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 C9J4A7 227 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 K7EM74 188 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 RASGRF2O14827 1237 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 TMEM63AO94886 807 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 S1PR4O95977 384 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 ESR1P03372 595 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 MLNP12872 115 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 FMO4P31512 558 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 CD97P48960 835 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 ADARP55265 1226 aaKnown RBP12.92□□□□□ -0.34
VCX3A-202ENST00000398729 IL10RAQ13651 578 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 PTCHD3Q3KNS1 767 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 CTSL3PQ5NE16 218 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 ANKRD22Q5VYY1 191 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 LCN10Q6JVE6 187 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 TLDC1Q6P9B6 456 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 CAND1Q86VP6 1230 aaKnown RBP12.92□□□□□ -0.34
VCX3A-202ENST00000398729 APLFQ8IW19 511 aaPredicted RBP12.92□□□□□ -0.34
VCX3A-202ENST00000398729 REXO1L1PQ8IX06 675 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 SLC35F6Q8N357 371 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 RAB42Q8N4Z0 105 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 LINC01555Q8NAE3 123 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 MCUQ8NE86 351 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 OR2L8Q8NGY9 312 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 MAGEC3Q8TD91 643 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 GRK7Q8WTQ7 553 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 COG1Q8WTW3 980 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 LPGAT1Q92604 370 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 RAD51AP1Q96B01 352 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 FOPNLQ96NB1 174 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 BIRC8Q96P09 236 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 OSBPL9Q96SU4 736 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 XAB2Q9HCS7 855 aaKnown RBP12.92□□□□□ -0.34
VCX3A-202ENST00000398729 INTS7Q9NVH2 962 aaKnown RBP12.92□□□□□ -0.34
VCX3A-202ENST00000398729 IRAK4Q9NWZ3 460 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.92□□□□□ -0.34
VCX3A-202ENST00000398729 CIDEBQ9UHD4 219 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 TCFL5Q9UL49 500 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 PLCL2Q9UPR0 1127 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 VPS9D1Q9Y2B5 631 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 CRYL1Q9Y2S2 319 aa12.92□□□□□ -0.34
VCX3A-202ENST00000398729 FAM237BA0A1B0GVD1 139 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 GOLGA8MH3BSY2 632 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 ZSCAN9O15535 394 aaPredicted RBP12.91□□□□□ -0.34
VCX3A-202ENST00000398729 KIF5CO60282 957 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 PHF2O75151 1096 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 C1orf105O95561 183 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 CHRM3P20309 590 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 MAGP20916 626 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 CCNFP41002 786 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 GABRA4P48169 554 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 DHX34Q14147 1143 aaKnown RBP12.91□□□□□ -0.34
VCX3A-202ENST00000398729 GRB7Q14451 532 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 NCF4Q15080 339 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 SF1Q15637 639 aaKnown RBP12.91□□□□□ -0.34
VCX3A-202ENST00000398729 RHBDD2Q6NTF9 364 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 TCTN3Q6NUS6 607 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 NEPROQ6NW34 567 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 FAM198BQ6UWH4 519 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 TAX1BP1Q86VP1 789 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 CILP2Q8IUL8 1156 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 FAM20CQ8IXL6 584 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 DNAJC22Q8N4W6 341 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 C2orf73Q8N5S3 287 aaPredicted RBP12.91□□□□□ -0.34
VCX3A-202ENST00000398729 PROKR1Q8TCW9 393 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 ACTRT1Q8TDG2 376 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 ZNF669Q96BR6 464 aaPredicted RBP12.91□□□□□ -0.34
VCX3A-202ENST00000398729 SERPINB12Q96P63 405 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 IL17FQ96PD4 163 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 C17orf62Q9BQA9 187 aa12.91□□□□□ -0.34
VCX3A-202ENST00000398729 SPRTNQ9H040 489 aaPredicted RBP12.91□□□□□ -0.34
VCX3A-202ENST00000398729 TLK1Q9UKI8 766 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms