RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SUZ12Q15022 739 aaKnown RBP15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 C10orf120Q5SQS8 335 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 CCSAPQ6IQ19 270 aaPredicted RBP15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 ERAP2Q6P179 960 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 TRIB3Q96RU7 358 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 FEM1AQ9BSK4 669 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 AMBRA1Q9C0C7 1298 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 MMP27Q9H306 513 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 BPIFA1Q9NP55 256 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 UBA2Q9UBT2 640 aaPredicted RBP15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 AGAP5A6NIR3 686 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 IQCF5A8MTL0 148 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 B8ZZF3 427 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 H0Y626 953 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 GNGT2O14610 69 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 CA12O43570 354 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 TRIM16O95361 564 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 CST1P01037 141 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 NPPAP01160 153 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 EPOP01588 193 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 APOA1P02647 267 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 RPLP2P05387 115 aaKnown RBP15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 PKMP14618 531 aaKnown RBP15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 THPOP40225 353 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 FLT3LGP49771 235 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 FCGRTP55899 365 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 NCS1P62166 190 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 CD47Q08722 323 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 PTPRRQ15256 657 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 COLEC12Q5KU26 742 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 GDPD3Q7L5L3 318 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 RBM23Q86U06 439 aaKnown RBP15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 SLC51BQ86UW2 128 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 METTL4Q8N3J2 472 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 FAM83FQ8NEG4 500 aaPredicted RBP15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 OR7D4Q8NG98 312 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 OR10A6Q8NH74 314 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 ZNF583Q96ND8 569 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 ZNF382Q96SR6 550 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 ZIC5Q96T25 663 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 TBCDQ9BTW9 1192 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 CENPOQ9BU64 300 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 VAPAQ9P0L0 249 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 MARCH2Q9P0N8 246 aa15.63■□□□□ 0.09
CHMP1A-201ENST00000397901 PABPN1LA6NDY0 278 aaKnown RBP15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 GPR39O43194 453 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 B4GALT3O60512 393 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 TSPAN3O60637 253 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 ASGR1P07306 291 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 HTR3AP46098 478 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 OR2B6P58173 313 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 DEFA1P59665 94 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 DEFA3P59666 94 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 IL2P60568 153 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 HSPA14Q0VDF9 509 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 PWP1Q13610 501 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 AP5B1Q2VPB7 878 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 CTSL3PQ5NE16 218 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 PNCKQ6P2M8 343 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 SPESP1Q6UW49 350 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 ABI1Q8IZP0 508 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 CELF2-AS1Q8N7Q2 184 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 KIAA1958Q8N8K9 716 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 OR2T12Q8NG77 320 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 SPON2Q9BUD6 331 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 THUMPD3Q9BV44 507 aaKnown RBP15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 SMPD4Q9NXE4 827 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 FKBPLQ9UIM3 349 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 NEUROG3Q9Y4Z2 214 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 COMMD10Q9Y6G5 202 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 TDRD15B5MCY1 1934 aaKnown RBP15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 PRKACGP22612 351 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 MC4RP32245 332 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 NUDT1P36639 197 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 TM4SF4P48230 202 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 FPGSQ05932 587 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 KCNAB2Q13303 367 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 RFTN2Q52LD8 501 aaPredicted RBP15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 GATAD2AQ86YP4 633 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 EFHBQ8N7U6 833 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 CD200R1Q8TD46 325 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 VPS35Q96QK1 796 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 ADAM2Q99965 735 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 IKZF5Q9H5V7 419 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 TM9SF3Q9HD45 589 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 HEBP1Q9NRV9 189 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 ADGRE2Q9UHX3 823 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 ZMYM5Q9UJ78 669 aa15.62■□□□□ 0.09
CHMP1A-201ENST00000397901 A0A0U1RQF3 1178 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 DRGXA6NNA5 263 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 E5RI56 91 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 ERVH48-1M5A8F1 160 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 HAT1O14929 419 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 POLR1CO15160 346 aaPredicted RBP15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 ZW10O43264 779 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 CCDC159P0C7I6 412 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 DDOSTP39656 456 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 ZNF45Q02386 682 aa15.61■□□□□ 0.09
CHMP1A-201ENST00000397901 PTGR1Q14914 329 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms