RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 NAT9Q9BTE0 207 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 XKR8Q9H6D3 395 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 PPCSQ9HAB8 311 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 FANCEQ9HB96 536 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 INTS10Q9NVR2 710 aaKnown RBP14.11□□□□□ -0.15
SEC13-208ENST00000397109 ACTR10Q9NZ32 417 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 ICKQ9UPZ9 632 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 TEX264Q9Y6I9 313 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 SLC9B1P1A6NJY1 282 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 KIAA0754O94854 1291 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 ABHD2P08910 425 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 EBLN1P0CF75 366 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 LIFP15018 202 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 FMO4P31512 558 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 ABRQ12979 859 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 KCNAB1Q14722 419 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 LONRF1Q17RB8 773 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 TTC23LQ6PF05 361 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 UNC5AQ6ZN44 842 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 VRK3Q8IV63 474 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 DCUN1D3Q8IWE4 304 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 GABPB2Q8TAK5 448 aaPredicted RBP14.1□□□□□ -0.15
SEC13-208ENST00000397109 SLC39A7Q92504 469 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 STAMBPL1Q96FJ0 436 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 ELMO2Q96JJ3 720 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 SLC45A3Q96JT2 553 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 BIRC8Q96P09 236 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 BBC3Q96PG8 261 aaPredicted RBP14.1□□□□□ -0.15
SEC13-208ENST00000397109 CCDC77Q9BR77 488 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 PITPNM3Q9BZ71 974 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 EPB41L4BQ9H329 900 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 GPN2Q9H9Y4 310 aaPredicted RBP14.1□□□□□ -0.15
SEC13-208ENST00000397109 LATS2Q9NRM7 1088 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 LNPEPQ9UIQ6 1025 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 SEC16AO15027 2179 aa14.1□□□□□ -0.15
SEC13-208ENST00000397109 ZCWPW2A0A1B0GU75 182 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 ITGB2P05107 769 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 CHRM5P08912 532 aaPredicted RBP14.09□□□□□ -0.15
SEC13-208ENST00000397109 CCNYL3P0C7X3 344 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 MSL3P1P0C860 447 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 ZNF28P17035 718 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 STAT5AP42229 794 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 KYNUQ16719 465 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 CTSL3PQ5NE16 218 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 KIAA1614Q5VZ46 1190 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 ZNF470Q6ECI4 717 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 SPESP1Q6UW49 350 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 CENPUQ71F23 418 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 CFAP61Q8NHU2 1237 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 TTC9Q92623 222 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 PPM1MQ96MI6 270 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 PWWP2AQ96N64 755 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 FOPNLQ96NB1 174 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 EBNA1BP2Q99848 306 aaKnown RBP14.09□□□□□ -0.15
SEC13-208ENST00000397109 WDR83Q9BRX9 315 aaKnown RBP14.09□□□□□ -0.15
SEC13-208ENST00000397109 CDC42EP4Q9H3Q1 356 aaKnown RBP14.09□□□□□ -0.15
SEC13-208ENST00000397109 CRYL1Q9Y2S2 319 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 FAM169AQ9Y6X4 670 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 SPTBP11277 2137 aa14.09□□□□□ -0.15
SEC13-208ENST00000397109 LOC101059948A0A1B0GTJ6 334 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 ZNF891A8MT65 544 aaPredicted RBP14.08□□□□□ -0.16
SEC13-208ENST00000397109 PKMP14618 531 aaKnown RBP14.08□□□□□ -0.16
SEC13-208ENST00000397109 ST6GAL1P15907 406 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 WT1P19544 449 aaPredicted RBP14.08□□□□□ -0.16
SEC13-208ENST00000397109 CHRM3P20309 590 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 ATP5DP30049 168 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 RAB28P51157 221 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 MC1RQ01726 317 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 KIR2DS3Q14952 304 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 BBS9Q3SYG4 887 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 TTMPQ5BVD1 217 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 PWWP2BQ6NUJ5 590 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.08□□□□□ -0.16
SEC13-208ENST00000397109 GALNT6Q8NCL4 622 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 MAGEC3Q8TD91 643 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 SLC22A18Q96BI1 424 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 ARL8AQ96BM9 186 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 ZNF501Q96CX3 271 aaPredicted RBP14.08□□□□□ -0.16
SEC13-208ENST00000397109 TRAPPC9Q96Q05 1148 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 TRIM56Q9BRZ2 755 aaKnown RBP14.08□□□□□ -0.16
SEC13-208ENST00000397109 RAB11FIP5Q9BXF6 653 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 SLC12A9Q9BXP2 914 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 TWSG1Q9GZX9 223 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 CCDC68Q9H2F9 335 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 C20orf96Q9NUD7 363 aaPredicted RBP14.08□□□□□ -0.16
SEC13-208ENST00000397109 KLHL42Q9P2K6 505 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 PADI1Q9ULC6 663 aa14.08□□□□□ -0.16
SEC13-208ENST00000397109 E5RI56 91 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 S1PR4O95977 384 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 TPBGLP0DKB5 382 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 UGT2B7P16662 529 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 PGAM1P18669 254 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 PKLRP30613 574 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 CCNFP41002 786 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 ELK3P41970 407 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 PDIA2Q13087 525 aaKnown RBP14.07□□□□□ -0.16
SEC13-208ENST00000397109 GPR19Q15760 415 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 KRT71Q3SY84 523 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 STEAP4Q687X5 459 aa14.07□□□□□ -0.16
SEC13-208ENST00000397109 IGDCC3Q8IVU1 814 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms