RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 SEMA5BQ9P283 1151 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 SLC17A6Q9P2U8 582 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 EPHA6Q9UF33 1036 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 FBXO5Q9UKT4 447 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 CNOT6Q9ULM6 557 aaKnown RBP13.3□□□□□ -0.28
SEC13-205ENST00000397101 ZNF451Q9Y4E5 1061 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 HIVEP3Q5T1R4 2406 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 PRRC2CQ9Y520 2896 aaKnown RBP13.29□□□□□ -0.28
SEC13-205ENST00000397101 A1L4Q6 167 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 GOLGA6L10A6NI86 522 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 TCP11X1B4DZS4 312 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 GPR89AB7ZAQ6 455 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 RASGRF2O14827 1237 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 NUAK1O60285 661 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 CEACAM4O75871 244 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 DNAJB5O75953 348 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 UBXN7O94888 489 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 SLC25A14O95258 325 aaPredicted RBP13.29□□□□□ -0.28
SEC13-205ENST00000397101 F7P08709 466 aaPredicted RBP13.29□□□□□ -0.28
SEC13-205ENST00000397101 NUDT17P0C025 328 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 GPR89BP0CG08 455 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 OGNP20774 298 aaKnown RBP13.29□□□□□ -0.28
SEC13-205ENST00000397101 PSMA3P25788 255 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 SLC1A2P43004 574 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 SLCO1A2P46721 670 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 TTPAP49638 278 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 SH3BP2P78314 561 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 MPP1Q00013 466 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 KRT71Q3SY84 523 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 CEP85LQ5SZL2 805 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 HENMT1Q5T8I9 393 aaKnown RBP13.29□□□□□ -0.28
SEC13-205ENST00000397101 LGSNQ5TDP6 509 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 CERS6Q6ZMG9 384 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 TAOK1Q7L7X3 1001 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 SLC26A11Q86WA9 606 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 SERPINA9Q86WD7 417 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 PHYKPLQ8IUZ5 450 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 GOLGA6L1Q8N7Z2 621 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 CT55Q8WUE5 264 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 PAFAH2Q99487 392 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 CPNE1Q99829 537 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 FUT8Q9BYC5 575 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 CCDC68Q9H2F9 335 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 ACTL8Q9H568 366 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 MARCH4Q9P2E8 410 aaPredicted RBP13.29□□□□□ -0.28
SEC13-205ENST00000397101 LNPEPQ9UIQ6 1025 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 KCNK6Q9Y257 313 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 VPS9D1Q9Y2B5 631 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 ABCA12Q86UK0 2595 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 MED13Q9UHV7 2174 aa13.29□□□□□ -0.28
SEC13-205ENST00000397101 CFAP99D6REC4 459 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 GAPDHSO14556 408 aaPredicted RBP13.28□□□□□ -0.28
SEC13-205ENST00000397101 GPR39O43194 453 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 DPM1O60762 260 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 CLDN1O95832 211 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 LDLRP01130 860 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 RALBP11234 206 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 ACP5P13686 325 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 MSH3P20585 1137 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 PTPN4P29074 926 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 SPRP35270 261 aaPredicted RBP13.28□□□□□ -0.28
SEC13-205ENST00000397101 GP5P40197 560 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 CD151P48509 253 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 GTF2H3Q13889 308 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 SEMA3AQ14563 771 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 EIF2S3LQ2VIR3 472 aaKnown RBP13.28□□□□□ -0.28
SEC13-205ENST00000397101 RNF187Q5TA31 235 aaPredicted RBP13.28□□□□□ -0.28
SEC13-205ENST00000397101 GRTP1Q5TC63 336 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 LRIG3Q6UXM1 1119 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 PACS1Q6VY07 963 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 CROCCP2Q86T23 111 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 CILP2Q8IUL8 1156 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 RBM12BQ8IXT5 1001 aaKnown RBP13.28□□□□□ -0.28
SEC13-205ENST00000397101 PIANPQ8IYJ0 282 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 C2CD4AQ8NCU7 369 aaPredicted RBP13.28□□□□□ -0.28
SEC13-205ENST00000397101 GPR150Q8NGU9 434 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 EPS8L3Q8TE67 593 aaKnown RBP13.28□□□□□ -0.28
SEC13-205ENST00000397101 SGSM3Q96HU1 749 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 TCF12Q99081 682 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 COPS8Q99627 209 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 ROPN1BQ9BZX4 212 aaPredicted RBP13.28□□□□□ -0.28
SEC13-205ENST00000397101 PPCSQ9HAB8 311 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 ROPN1Q9HAT0 212 aaPredicted RBP13.28□□□□□ -0.28
SEC13-205ENST00000397101 PDE7BQ9NP56 450 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 POT1Q9NUX5 634 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 NFKBIL1Q9UBC1 381 aaPredicted RBP13.28□□□□□ -0.28
SEC13-205ENST00000397101 TBK1Q9UHD2 729 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 SLC24A2Q9UI40 661 aa13.28□□□□□ -0.28
SEC13-205ENST00000397101 ZNF106Q9H2Y7 1883 aaKnown RBP13.27□□□□□ -0.28
SEC13-205ENST00000397101 FADS2P1A8MWK0 482 aa13.27□□□□□ -0.29
SEC13-205ENST00000397101 GRID2O43424 1007 aa13.27□□□□□ -0.29
SEC13-205ENST00000397101 SNX2O60749 519 aa13.27□□□□□ -0.29
SEC13-205ENST00000397101 FAM155BO75949 473 aa13.27□□□□□ -0.29
SEC13-205ENST00000397101 HAUS5O94927 633 aa13.27□□□□□ -0.29
SEC13-205ENST00000397101 VIPP01282 170 aa13.27□□□□□ -0.29
SEC13-205ENST00000397101 ZNF7P17097 686 aaPredicted RBP13.27□□□□□ -0.29
SEC13-205ENST00000397101 AMD1P17707 334 aa13.27□□□□□ -0.29
SEC13-205ENST00000397101 NELFEP18615 380 aaKnown RBP13.27□□□□□ -0.29
SEC13-205ENST00000397101 SAT1P21673 171 aa13.27□□□□□ -0.29
SEC13-205ENST00000397101 ELAVL4P26378 380 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms