RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 PI15O43692 258 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 PCDH7O60245 1069 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 ARL2P36404 184 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 CORO7P57737 925 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 LRRC69Q6ZNQ3 347 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 DNAJC19Q96DA6 116 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 ZBED6CLQ96FA7 236 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-208ENST00000397030 CCDC115Q96NT0 180 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 MAFBQ9Y5Q3 323 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-208ENST00000397030 MTTPP55157 894 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 NET1Q7Z628 596 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-208ENST00000397030 CENPSQ8N2Z9 138 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 HNRNPABQ99729 332 aaKnown RBP17.1■□□□□ 0.33
MCF2L-208ENST00000397030 FUT8Q9BYC5 575 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 TPSD1Q9BZJ3 242 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 SMAD9O15198 467 aaKnown RBP17.1■□□□□ 0.33
MCF2L-208ENST00000397030 ZNF311Q5JNZ3 666 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 UBQLNLQ8IYU4 475 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 NPLOC4Q8TAT6 608 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 TMA7Q9Y2S6 64 aaKnown RBP17.1■□□□□ 0.33
MCF2L-208ENST00000397030 SPEF1Q9Y4P9 236 aa17.1■□□□□ 0.33
MCF2L-208ENST00000397030 OR51F1A6NGY5 319 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 VIPR1P32241 457 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 ITPRIPL2Q3MIP1 535 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 MGME1Q9BQP7 344 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 COL20A1Q9P218 1284 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 PPM1HQ9ULR3 514 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 HCN4Q9Y3Q4 1203 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 TARDBPQ13148 414 aaKnown RBP eCLIP17.09■□□□□ 0.33
MCF2L-208ENST00000397030 TSTD2Q5T7W7 516 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 PYHIN1Q6K0P9 492 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 QSOX2Q6ZRP7 698 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 TRMT10AQ8TBZ6 339 aaKnown RBP17.09■□□□□ 0.33
MCF2L-208ENST00000397030 MMABQ96EY8 250 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-208ENST00000397030 UPB1Q9UBR1 384 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 FBXW11Q9UKB1 542 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 GABRQQ9UN88 632 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 ELOVL7A1L3X0 281 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 H3BQF6 201 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 CSTBP04080 98 aaKnown RBP17.09■□□□□ 0.33
MCF2L-208ENST00000397030 ELOCQ15369 112 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 A0A0U1RQJ8 604 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 FAM234BA2RU67 622 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 NOMO1Q15155 1222 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 REP15Q6BDI9 236 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 CXorf56Q9H5V9 222 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 TVP23BQ9NYZ1 205 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 A0A1B0GVT2 93 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 YJEFN3A6XGL0 299 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 LEFTY2O00292 366 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 SLC33A1O00400 549 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-208ENST00000397030 SNAP91O60641 907 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 ADH1BP00325 375 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 OR3A3P47888 321 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 OR3A2P47893 321 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 KLHL26Q53HC5 615 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 ERICH5Q6P6B1 374 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 C12orf40Q86WS4 652 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 PNLDC1Q8NA58 520 aaKnown RBP17.09■□□□□ 0.33
MCF2L-208ENST00000397030 OR13C4Q8NGS5 318 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 ACMSDQ8TDX5 336 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 ADAD1Q96M93 576 aaKnown RBP17.09■□□□□ 0.33
MCF2L-208ENST00000397030 INPP4AQ96PE3 977 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-208ENST00000397030 UTS2RQ9UKP6 389 aa17.09■□□□□ 0.33
MCF2L-208ENST00000397030 ITGA5P08648 1049 aa17.08■□□□□ 0.33
MCF2L-208ENST00000397030 PSMD7P51665 324 aa17.08■□□□□ 0.33
MCF2L-208ENST00000397030 ARFRP1Q13795 201 aa17.08■□□□□ 0.33
MCF2L-208ENST00000397030 C1orf189Q5VU69 101 aa17.08■□□□□ 0.33
MCF2L-208ENST00000397030 RGMAQ96B86 450 aa17.08■□□□□ 0.33
MCF2L-208ENST00000397030 TCF12Q99081 682 aa17.08■□□□□ 0.33
MCF2L-208ENST00000397030 SLC39A3Q9BRY0 314 aa17.08■□□□□ 0.33
MCF2L-208ENST00000397030 TMEM175Q9BSA9 504 aa17.08■□□□□ 0.33
MCF2L-208ENST00000397030 OR8D2Q9GZM6 311 aa17.08■□□□□ 0.33
MCF2L-208ENST00000397030 MAU2Q9Y6X3 613 aa17.08■□□□□ 0.33
MCF2L-208ENST00000397030 CYP11A1P05108 521 aa17.08■□□□□ 0.33
MCF2L-208ENST00000397030 DAOAP59103 153 aa17.08■□□□□ 0.33
MCF2L-208ENST00000397030 VGLL2Q8N8G2 317 aa17.08■□□□□ 0.33
MCF2L-208ENST00000397030 NPLQ9BXD5 320 aaPredicted RBP17.08■□□□□ 0.33
MCF2L-208ENST00000397030 NIFKQ9BYG3 293 aaKnown RBP17.08■□□□□ 0.33
MCF2L-208ENST00000397030 TIMM8BQ9Y5J9 83 aaPredicted RBP17.08■□□□□ 0.33
MCF2L-208ENST00000397030 BCKDKO14874 412 aa17.08■□□□□ 0.32
MCF2L-208ENST00000397030 SAR1AQ9NR31 198 aa17.08■□□□□ 0.32
MCF2L-208ENST00000397030 PPP1R11O60927 126 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-208ENST00000397030 PRAMEF12O95522 483 aa17.08■□□□□ 0.32
MCF2L-208ENST00000397030 VSX2P58304 361 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-208ENST00000397030 GATSQ8NAP1 163 aa17.08■□□□□ 0.32
MCF2L-208ENST00000397030 TSEN2Q8NCE0 465 aaKnown RBP17.08■□□□□ 0.32
MCF2L-208ENST00000397030 CLPTM1LQ96KA5 538 aa17.08■□□□□ 0.32
MCF2L-208ENST00000397030 KREMEN1Q96MU8 473 aa17.08■□□□□ 0.32
MCF2L-208ENST00000397030 PCDHB18PQ96TA0 734 aa17.08■□□□□ 0.32
MCF2L-208ENST00000397030 HSD17B14Q9BPX1 270 aa17.08■□□□□ 0.32
MCF2L-208ENST00000397030 RBPJLQ9UBG7 517 aa17.08■□□□□ 0.32
MCF2L-208ENST00000397030 NUP50Q9UKX7 468 aa17.08■□□□□ 0.32
MCF2L-208ENST00000397030 F7P08709 466 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-208ENST00000397030 RAB8AP61006 207 aa17.08■□□□□ 0.32
MCF2L-208ENST00000397030 NFKB2Q00653 900 aa17.08■□□□□ 0.32
MCF2L-208ENST00000397030 TRAP1Q12931 704 aaKnown RBP17.08■□□□□ 0.32
MCF2L-208ENST00000397030 DENND6BQ8NEG7 585 aa17.08■□□□□ 0.32
MCF2L-208ENST00000397030 GPATCH1Q9BRR8 931 aaKnown RBP17.08■□□□□ 0.32
MCF2L-208ENST00000397030 AP2A1O95782 977 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms