RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 TXNDC15Q96J42 360 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 TSSK3Q96PN8 268 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 TMEM246Q9BRR3 403 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 IPPKQ9H8X2 491 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 KRT84Q9NSB2 600 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 EHD3Q9NZN3 535 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 GABRQQ9UN88 632 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 MYLKQ15746 1914 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 GABRDO14764 452 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 MUSKO15146 869 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 FGF10O15520 208 aaPredicted RBP9.62□□□□□ -0.87
TRIM39-203ENST00000396547 SLC26A3P40879 764 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 LHX1P48742 406 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 ARPC4P59998 168 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 IL2P60568 153 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 XKR7Q5GH72 579 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 NXNL2Q5VZ03 156 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 DPP9Q86TI2 863 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 LRRTM3Q86VH5 581 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 HIPK1Q86Z02 1210 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 GALNT13Q8IUC8 556 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 PIANPQ8IYJ0 282 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 TCAIMQ8N3R3 496 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 ATP6V0D2Q8N8Y2 350 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 RPRD1AQ96P16 312 aaPredicted RBP9.62□□□□□ -0.87
TRIM39-203ENST00000396547 APOL4Q9BPW4 351 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 INPP5KQ9BT40 448 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 COPS4Q9BT78 406 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 BTBD2Q9BX70 525 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 RUBCNLQ9H714 662 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 OGDHLQ9ULD0 1010 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 NEU3Q9UQ49 428 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 RNF6Q9Y252 685 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 SPO11Q9Y5K1 396 aa9.62□□□□□ -0.87
TRIM39-203ENST00000396547 CTDSP2O14595 271 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 HOXC11O43248 304 aaPredicted RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 ZW10O43264 779 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 SH3BGRLO75368 114 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 VPS26AO75436 327 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 WISP3O95389 354 aaPredicted RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 MED26O95402 600 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 NDST3O95803 873 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 PGRP06401 933 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 ATXN1LP0C7T5 689 aaKnown RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 PRR35P0CG20 571 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 HOXD8P13378 290 aaPredicted RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 GRK3P35626 688 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 FLT3LGP49771 235 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 CRISP3P54108 245 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 CASP9P55211 416 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 TIGD6Q17RP2 521 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 ZFP69Q49AA0 526 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 SETMARQ53H47 684 aaPredicted RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 UBXN11Q5T124 520 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 PIK3R6Q5UE93 754 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 ZCCHC8Q6NZY4 707 aaKnown RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 PJA1Q8NG27 643 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 SPATA17Q96L03 361 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 NEDD4LQ96PU5 975 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 PAQR5Q9NXK6 330 aaPredicted RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 AFF4Q9UHB7 1163 aaKnown RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 LCHNA4D1U4 455 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 CENPXA8MT69 81 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 NBNO60934 754 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 SMIM10L2AP0DMW4 78 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 SMIM10L2BP0DMW5 78 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 COL6A1P12109 1028 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 GRK5P34947 590 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 RPP38P78345 283 aaKnown RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 CAMK2BQ13554 666 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 PLEKHG6Q3KR16 790 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 BCL7AQ4VC05 210 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 RAB41Q5JT25 222 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 SPANXN2Q5MJ10 180 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 ATAD3CQ5T2N8 411 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 SYT6Q5T7P8 510 aaPredicted RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 PSAPL1Q6NUJ1 521 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 EFL1Q7Z2Z2 1120 aaKnown RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 GLT6D1Q7Z4J2 308 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 ELMOD1Q8N336 334 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 AMER2Q8N7J2 671 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 OR52J3Q8NH60 311 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 UTP15Q8TED0 518 aaKnown RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 DNASE1L2Q92874 299 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 PYURFQ96I23 114 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 RDH12Q96NR8 316 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 NECTIN4Q96NY8 510 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 TSEN34Q9BSV6 310 aaKnown RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 DERL2Q9GZP9 239 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 NSUN3Q9H649 340 aaKnown RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 SP140LQ9H930 580 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 ARNT2Q9HBZ2 717 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 ABI2Q9NYB9 513 aaPredicted RBP9.61□□□□□ -0.87
TRIM39-203ENST00000396547 TAS2R16Q9NYV7 291 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 LOC110117498-PIK3R3F6TDL0 507 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 F8W810 466 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 E2F3O00716 465 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 CYBAP13498 195 aa9.61□□□□□ -0.87
TRIM39-203ENST00000396547 SMPD1P17405 629 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms