RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 TRPV4Q9HBA0 871 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 MSRAQ9UJ68 235 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 ANAPC2Q9UJX6 822 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 RNASEH1O60930 286 aaKnown RBP15.72■□□□□ 0.11
SNX6-202ENST00000396526 PGRP06401 933 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 EPHX1P07099 455 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 BCKDHAP12694 445 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 ATP6V1B2P21281 511 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 NLRP8Q86W28 1048 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 ARRDC3Q96B67 414 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 SLC45A3Q96JT2 553 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 SEMA6AQ9H2E6 1030 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 TRIM39Q9HCM9 518 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 INTS7Q9NVH2 962 aaKnown RBP15.72■□□□□ 0.11
SNX6-202ENST00000396526 MBD1Q9UIS9 605 aaPredicted RBP15.72■□□□□ 0.11
SNX6-202ENST00000396526 NOTCH4Q99466 2003 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 SLC5A10A0PJK1 596 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 AREL1O15033 823 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 DENRO43583 198 aaKnown RBP15.71■□□□□ 0.11
SNX6-202ENST00000396526 C6P13671 934 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 CLDN8P56748 225 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 NEK5Q6P3R8 708 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 ERMP1Q7Z2K6 904 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 CFAP206Q8IYR0 622 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 KIAA2013Q8IYS2 634 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 VN1R2Q8NFZ6 395 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 C8orf4Q9NR00 106 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 CNOT6Q9ULM6 557 aaKnown RBP15.71■□□□□ 0.11
SNX6-202ENST00000396526 MAPRE3Q9UPY8 281 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 ARHGEF33A8MVX0 844 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 ANKRD28O15084 1053 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 SGTAO43765 313 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 ZCCHC18P0CG32 403 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 ZFP36L2P47974 494 aaKnown RBP15.71■□□□□ 0.11
SNX6-202ENST00000396526 PNLIPRP1P54315 467 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 GPR149Q86SP6 731 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 MMAAQ8IVH4 418 aaKnown RBP15.71■□□□□ 0.11
SNX6-202ENST00000396526 TBC1D21Q8IYX1 336 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 SLC22A15Q8IZD6 547 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 TRPV3Q8NET8 790 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 STARD8Q92502 1023 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 REPS1Q96D71 796 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 UHRF1Q96T88 793 aaPredicted RBP15.71■□□□□ 0.11
SNX6-202ENST00000396526 ACPTQ9BZG2 426 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 OR2AG1Q9H205 316 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 CDH7Q9ULB5 785 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 PCDHGA11Q9Y5H2 935 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 AP4B1Q9Y6B7 739 aa15.71■□□□□ 0.11
SNX6-202ENST00000396526 ASPDHA6ND91 283 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 A6NHS1 94 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 MMP20O60882 483 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 ERN1O75460 977 aaKnown RBP15.7■□□□□ 0.1
SNX6-202ENST00000396526 TIPRLO75663 272 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 PREPP48147 710 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 CHN2P52757 468 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 DPTQ07507 201 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 CSTF3Q12996 717 aaKnown RBP15.7■□□□□ 0.1
SNX6-202ENST00000396526 BCL7AQ4VC05 210 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 MTX3Q5HYI7 312 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 TRMT11Q7Z4G4 463 aaKnown RBP15.7■□□□□ 0.1
SNX6-202ENST00000396526 AMIGO2Q86SJ2 522 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 POP5Q969H6 163 aaKnown RBP15.7■□□□□ 0.1
SNX6-202ENST00000396526 TMEM74Q96NL1 305 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 MCOLN1Q9GZU1 580 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 BPTFQ12830 3046 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 VEGFDO43915 354 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 PLIN5Q00G26 463 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 TMEM52BQ4KMG9 183 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 GLYATQ6IB77 296 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 CAPN13Q6MZZ7 669 aaPredicted RBP15.7■□□□□ 0.1
SNX6-202ENST00000396526 SYTL1Q8IYJ3 562 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 METTL2AQ96IZ6 378 aaKnown RBP15.7■□□□□ 0.1
SNX6-202ENST00000396526 ACTL8Q9H568 366 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 COQ6Q9Y2Z9 468 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 PCDHB3Q9Y5E6 796 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 APODP05090 189 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 HSD3B1P14060 373 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 PRPH2P23942 346 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 HSD3B2P26439 372 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 NEK2P51955 445 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 DPY19L1Q2PZI1 675 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 SPANXN4Q5MJ08 99 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 C9orf50Q5SZB4 431 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 FAM109BQ6ICB4 259 aaPredicted RBP15.7■□□□□ 0.1
SNX6-202ENST00000396526 ITCHQ96J02 903 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 OSBPL11Q9BXB4 747 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 CLMPQ9H6B4 373 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 STOX2Q9P2F5 926 aaPredicted RBP15.7■□□□□ 0.1
SNX6-202ENST00000396526 DYRK1BQ9Y463 629 aa15.7■□□□□ 0.1
SNX6-202ENST00000396526 RNF103-CHMP3A0A140T963 221 aa15.69■□□□□ 0.1
SNX6-202ENST00000396526 SERTM1A2A2V5 107 aa15.69■□□□□ 0.1
SNX6-202ENST00000396526 BMP2P12643 396 aa15.69■□□□□ 0.1
SNX6-202ENST00000396526 ACPPP15309 386 aa15.69■□□□□ 0.1
SNX6-202ENST00000396526 CLCN2P51788 898 aa15.69■□□□□ 0.1
SNX6-202ENST00000396526 PFN3P60673 137 aa15.69■□□□□ 0.1
SNX6-202ENST00000396526 ACSM2AQ08AH3 577 aa15.69■□□□□ 0.1
SNX6-202ENST00000396526 USP39Q53GS9 565 aaKnown RBP15.69■□□□□ 0.1
SNX6-202ENST00000396526 ATAT1Q5SQI0 421 aa15.69■□□□□ 0.1
SNX6-202ENST00000396526 PPP2R2DQ66LE6 453 aa15.69■□□□□ 0.1
SNX6-202ENST00000396526 ACSM2BQ68CK6 577 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms