RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 GRM7Q14831 915 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 NKG7Q16617 165 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 FAM214AQ32MH5 1076 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 TUBB8Q3ZCM7 444 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 DARS2Q6PI48 645 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 FAM180AQ6UWF9 173 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 ISLR2Q6UXK2 745 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 MCATQ8IVS2 390 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 SRRM1Q8IYB3 904 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 BCORP1Q8N888 145 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 PHF12Q96QT6 1004 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 SLC22A11Q9NSA0 550 aa16.82■□□□□ 0.28
EXOSC3-202ENST00000396521 E2F3O00716 465 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 DSCR3O14972 297 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 PSMD3O43242 534 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 TJP3O95049 919 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 S1PR4O95977 384 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 MAGEA1P43355 309 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 CARSP49589 748 aaKnown RBP16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 CDKN1CP49918 316 aaPredicted RBP16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 SLC9A5Q14940 896 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 DBN1Q16643 649 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 HIF1AQ16665 826 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 PARP6Q2NL67 630 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 SYTL3Q4VX76 610 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 KIRREL2Q6UWL6 708 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 TTLL10Q6ZVT0 673 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 VSTM4Q8IW00 320 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 PIANPQ8IYJ0 282 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 NRTNQ99748 197 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 SLX1AQ9BQ83 275 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 TSSK1BQ9BXA7 367 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 LRRC40Q9H9A6 602 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 HS3ST3B1Q9Y662 390 aa16.81■□□□□ 0.28
EXOSC3-202ENST00000396521 MACROD2A1Z1Q3 448 aa16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 BHMG1C9JSJ3 638 aaPredicted RBP16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 SOCS6O14544 535 aa16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 SRPX2O60687 465 aaPredicted RBP16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 FDXRP22570 491 aa16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 PPARGP37231 505 aaPredicted RBP16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 MFAP5Q13361 173 aa16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 ART3Q13508 389 aa16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 OLIG2Q13516 323 aa16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 INAQ16352 499 aa16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 SP5Q6BEB4 398 aaPredicted RBP16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 TTC29Q8NA56 475 aaPredicted RBP16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 CCDC110Q8TBZ0 833 aa16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 RELTQ969Z4 430 aa16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 ZUFSPQ96AP4 578 aa16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 SPSB2Q99619 263 aa16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 OSBPL8Q9BZF1 889 aa16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 PCDHA3Q9Y5H8 950 aa16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 KLF2Q9Y5W3 355 aaPredicted RBP16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 ANKRD17O75179 2603 aaKnown RBP16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 PCSK5Q92824 1860 aa16.8■□□□□ 0.28
EXOSC3-202ENST00000396521 TARM1B6A8C7 271 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 CCL22O00626 93 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 PJA2O43164 708 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 TPBGLP0DKB5 382 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 MAGP20916 626 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 CD9P21926 228 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 PKLRP30613 574 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 CTNNA1P35221 906 aaKnown RBP16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 RBBP7Q16576 425 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 P3H1Q32P28 736 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 KCTD11Q693B1 232 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 ARHGEF18Q6ZSZ5 1173 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 LINC00523Q86TU6 105 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 ASZ1Q8WWH4 475 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 MRFAP1L1Q96HT8 127 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 TRIM56Q9BRZ2 755 aaKnown RBP16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 RAB11FIP5Q9BXF6 653 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 C10orf88Q9H8K7 445 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 IGSF5Q9NSI5 407 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 CUTCQ9NTM9 273 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 OLAHQ9NV23 265 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 COPG2Q9UBF2 871 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 MRFAP1Q9Y605 127 aa16.79■□□□□ 0.28
EXOSC3-202ENST00000396521 APCP25054 2843 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 FITM1A5D6W6 292 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 MROH6A6NGR9 719 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 VSTM2BA6NLU5 285 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 PCDH17O14917 1159 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 ZG16O60844 167 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 USP1O94782 785 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 GAS8O95995 478 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 HPP00738 406 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 MYBL2P10244 700 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 MSNP26038 577 aaKnown RBP16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 MARCKSL1P49006 195 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 SPA17Q15506 151 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 PRMT9Q6P2P2 845 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 MTFR2Q6P444 385 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 TTC23LQ6PF05 361 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 UNC5DQ6UXZ4 953 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 DCUN1D3Q8IWE4 304 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 PARP9Q8IXQ6 854 aa16.78■□□□□ 0.28
EXOSC3-202ENST00000396521 SLC22A15Q8IZD6 547 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms