RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 GNPTGQ9UJJ9 305 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 ERGIC3Q9Y282 383 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 TLR6Q9Y2C9 796 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 A0A096LPI6 279 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 FAM234BA2RU67 622 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 M0QZQ0 153 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 CCRL2O00421 344 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 TNFRSF10BO14763 440 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 VPS4BO75351 444 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 CREG1O75629 220 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 OTCP00480 354 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 ZNF7P17097 686 aaPredicted RBP12.93□□□□□ -0.34
NFKB1-202ENST00000394820 ITGALP20701 1170 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 C21orf33P30042 268 aaPredicted RBP12.93□□□□□ -0.34
NFKB1-202ENST00000394820 LEPRP48357 1165 aaKnown RBP12.93□□□□□ -0.34
NFKB1-202ENST00000394820 RPL26P61254 145 aaKnown RBP12.93□□□□□ -0.34
NFKB1-202ENST00000394820 SPIBQ01892 262 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 ACSM2AQ08AH3 577 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 SKIV2LQ15477 1246 aaKnown RBP12.93□□□□□ -0.34
NFKB1-202ENST00000394820 RTP2Q5QGT7 225 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 ACSM2BQ68CK6 577 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 SLC34A3Q8N130 599 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 OR5AK3PQ8NH89 298 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 BRSK1Q8TDC3 778 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 TSGA13Q96PP4 275 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 SNTG1Q9NSN8 517 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 COQ3Q9NZJ6 369 aa12.93□□□□□ -0.34
NFKB1-202ENST00000394820 ARIH1Q9Y4X5 557 aaPredicted RBP12.93□□□□□ -0.34
NFKB1-202ENST00000394820 TMEM88BA6NKF7 163 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 SLC1A7O00341 560 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 CA12O43570 354 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 AP1G1O43747 822 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 EPN2O95208 641 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 TACR2P21452 398 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 CHI3L1P36222 383 aaPredicted RBP12.92□□□□□ -0.34
NFKB1-202ENST00000394820 DNAJB13P59910 316 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 CSTF3Q12996 717 aaKnown RBP12.92□□□□□ -0.34
NFKB1-202ENST00000394820 SF3B4Q15427 424 aaKnown RBP eCLIP12.92□□□□□ -0.34
NFKB1-202ENST00000394820 KCNJ8Q15842 424 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 INTS11Q5TA45 600 aaKnown RBP12.92□□□□□ -0.34
NFKB1-202ENST00000394820 STK40Q8N2I9 435 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 LMNTD1Q8N9Z9 388 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 AUTS2Q8WXX7 1259 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 MAL2Q969L2 176 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 ZUFSPQ96AP4 578 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 LGALS12Q96DT0 336 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 SH3YL1Q96HL8 342 aaPredicted RBP12.92□□□□□ -0.34
NFKB1-202ENST00000394820 COQ7Q99807 217 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 ZBTB20Q9HC78 741 aaPredicted RBP12.92□□□□□ -0.34
NFKB1-202ENST00000394820 CAPN10Q9HC96 672 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 PCDHGA11Q9Y5H2 935 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 OAS3Q9Y6K5 1087 aaKnown RBP12.92□□□□□ -0.34
NFKB1-202ENST00000394820 HTTP42858 3142 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 PRMT5O14744 637 aaPredicted RBP12.92□□□□□ -0.34
NFKB1-202ENST00000394820 ADAM12O43184 909 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 TMCC2O75069 709 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 ADAMTS4O75173 837 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 PRAMEF1O95521 474 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 SOX6P35712 828 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 ACADVLP49748 655 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 PGBD5Q8N414 524 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 VANGL1Q8TAA9 524 aaPredicted RBP12.92□□□□□ -0.34
NFKB1-202ENST00000394820 NETO1Q8TDF5 533 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 ART5Q96L15 291 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 PPP3R2Q96LZ3 170 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 NECTIN4Q96NY8 510 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 TTYH2Q9BSA4 534 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 MFSD1Q9H3U5 465 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 RNF167Q9H6Y7 350 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 CD300AQ9UGN4 299 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 CPQQ9Y646 472 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 C5orf58C9J3I9 102 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 FFAR2O15552 330 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 CYP11A1P05108 521 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 TTPAP49638 278 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 ZNF135P52742 658 aaPredicted RBP12.92□□□□□ -0.34
NFKB1-202ENST00000394820 STC1P52823 247 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 CD83Q01151 205 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 SP3Q02447 781 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 MGAT3Q09327 533 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 MBTPS1Q14703 1052 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 TJAP1Q5JTD0 557 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 TXNDC11Q6PKC3 985 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 AFTPHQ6ULP2 937 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 RSPO2Q6UXX9 243 aaPredicted RBP12.92□□□□□ -0.34
NFKB1-202ENST00000394820 GHDCQ8N2G8 530 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 SVOPQ8N4V2 548 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 MINDY1Q8N5J2 469 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 OR2T11Q8NH01 316 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 OMA1Q96E52 524 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 BOCQ9BWV1 1114 aa12.92□□□□□ -0.34
NFKB1-202ENST00000394820 TDRD1Q9BXT4 1180 aaKnown RBP12.92□□□□□ -0.34
NFKB1-202ENST00000394820 KAT8Q9H7Z6 458 aaKnown RBP12.92□□□□□ -0.34
NFKB1-202ENST00000394820 SDR39U1Q9NRG7 319 aaPredicted RBP12.92□□□□□ -0.34
NFKB1-202ENST00000394820 SLC35F4A4IF30 521 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 OR2AG2A6NM03 316 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 CENPXA8MT69 81 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 PRRG1O14668 218 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 KERAO60938 352 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 CKMP06732 381 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms